RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 NDUFA3O95167 84 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 PRB2P02812 416 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 IGF1P05019 195 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 GSTP1P09211 210 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 MC5RP33032 325 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 SOX6P35712 828 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 ARFRP1Q13795 201 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 MMDQ15546 238 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 CDNFQ49AH0 187 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 IGSF11Q5DX21 431 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 HACD4Q5VWC8 232 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 MRAPQ8TCY5 172 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 HSPB9Q9BQS6 159 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 RHBDL2Q9NX52 303 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 ELF5Q9UKW6 265 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 IGKV1D-8A0A087WSZ0 117 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 H0YJW9 148 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 NBR2O15453 112 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 HLA-DRB1P01911 266 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 PF4P02776 101 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 TALDO1P37837 337 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 SLC35B1P78383 322 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 CFHR3Q02985 330 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF260Q3ZCT1 412 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 FAM131AQ6UXB0 335 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 OR5H6Q8NGV6 325 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 OR10J5Q8NHC4 309 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 MAFIPQ8WZ33 124 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 RNF5Q99942 180 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 GON7Q9BXV9 100 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 DCSTAMPQ9H295 470 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF221Q9UK13 617 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 RNF150Q9ULK6 438 aa11.93□□□□□ -0.5
SNRPA1-210ENST00000560383 A0A0A6YYH2 397 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 A6NJ64 397 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 BET1O15155 118 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 AIREO43918 545 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 RBBP9O75884 186 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 CNTFRP26992 372 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 PITPNAQ00169 270 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 PNLIPRP3Q17RR3 467 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 IDNKQ5T6J7 187 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 CROCCP3Q8IVE0 287 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF107Q9UII5 783 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
SNRPA1-210ENST00000560383 COL7A1Q02388 2944 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 TMEM235A6NFC5 223 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 TFAP2AP05549 437 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 IGLL1P15814 213 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 SLC6A1P30531 599 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 TEX38Q6PEX7 206 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 GLDNQ6ZMI3 551 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 SPATA2Q9UM82 520 aa11.91□□□□□ -0.5
SNRPA1-210ENST00000560383 SSX5O60225 188 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 IGHG4P01861 327 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 OR8U9P0C7N5 309 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 TGFBR1P36897 503 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 RPS19P39019 145 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 FOXE3Q13461 319 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 OR8U1Q8NH10 309 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 NUDCD2Q8WVJ2 157 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 GPR61Q9BZJ8 451 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 OR51J1Q9H342 316 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 SDHAF2Q9NX18 166 aa11.9□□□□□ -0.5
SNRPA1-210ENST00000560383 IGHV7-81A0A0B4J1V7 117 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 RRHO14718 337 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 ELANEP08246 267 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 OR5H8P0DN80 308 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 GNG2P59768 71 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 DRAXINQ8NBI3 349 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 OR13F1Q8NGS4 319 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 C5orf30Q96GV9 206 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 GINS4Q9BRT9 223 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 ST6GALNAC5Q9BVH7 336 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 KIAA1456Q9P272 454 aa11.89□□□□□ -0.51
SNRPA1-210ENST00000560383 H7C2Y5 167 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 M0R1X1 148 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 SPDEFO95238 335 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 IGKV1-16P04430 117 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 SMIM18P0DKX4 95 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 VDAC1P21796 283 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 PPIFP30405 207 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms