RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CORTO00230 105 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 CEACAM18A8MTB9 384 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 LIPFP07098 398 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 TFPI2P48307 235 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 DCAF12L2Q5VW00 463 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 SCGB1D4Q6XE38 83 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 CTHRC1Q96CG8 243 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 RHOVQ96L33 236 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 SIGLEC12Q96PQ1 595 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 RCC2Q9P258 522 aaKnown RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 KCNK7Q9Y2U2 307 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 UBE2L6O14933 153 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 CXorf1O96002 111 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 C1QCP02747 245 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 APOBEC3AP31941 199 aaPredicted RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 UQCRFS1P47985 274 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 NPVFQ9HCQ7 196 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 SIRT7Q9NRC8 400 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 WNT5AP41221 380 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 RPL8P62917 257 aaKnown RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 CDRT15L2A8MXV6 281 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 MRPL24Q96A35 216 aaKnown RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 SEC11CQ9BY50 192 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 MRPL37Q9BZE1 423 aaKnown RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 MFSD2BA6NFX1 497 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 RIGQ13278 110 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 IGSF11Q5DX21 431 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 WDR73Q6P4I2 378 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 MRPS18AQ9NVS2 196 aaKnown RBP11.61□□□□□ -0.55
TRAF3-208ENST00000560371 SPG11Q96JI7 2443 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 TMEM105Q8N8V8 129 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 LHFPL6Q9Y693 200 aa11.61□□□□□ -0.55
TRAF3-208ENST00000560371 TRAV34A0A0B4J273 112 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 ISG15P05161 165 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 EFNB2P52799 333 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 TMEM91Q6ZNR0 172 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
TRAF3-208ENST00000560371 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 SMAD7O15105 426 aaKnown RBP11.6□□□□□ -0.55
TRAF3-208ENST00000560371 RHBDL1O75783 438 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 SCTP09683 121 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 TMEM116Q8NCL8 245 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 IL22RA2Q969J5 263 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 MIEN1Q9BRT3 115 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 TICRRQ7Z2Z1 1910 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 HYPMO75409 117 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 LY6EQ16553 131 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 ZNF645Q8N7E2 425 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 VAMP8Q9BV40 100 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 PRDM14Q9GZV8 571 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 PRSS1P07477 247 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 TMEM140Q9NV12 185 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 GLRXP35754 106 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 PTGDSP41222 190 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 CEBPEQ15744 281 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 UNQ5815/PRO19632Q6UWF5 114 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
TRAF3-208ENST00000560371 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
TRAF3-208ENST00000560371 IGKV3D-15A0A087WSY6 115 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 RGS13O14921 159 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 IGKV3-15P01624 115 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 ZNF735P0CB33 412 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 FUT5Q11128 374 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 IGLV3-19P01714 112 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 TNFSF10P50591 281 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
TRAF3-208ENST00000560371 LRRC75BQ2VPJ9 315 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 RNF212Q495C1 297 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 OR10J6PQ8NGY7 276 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 PKIBQ9C010 78 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 CALYQ9NYX4 217 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 MOGAT2Q3SYC2 334 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 ACSF3Q4G176 576 aaPredicted RBP11.59□□□□□ -0.55
TRAF3-208ENST00000560371 BET1LQ9NYM9 111 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 CSN3P07498 182 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 EWSR1Q01844 656 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAF3-208ENST00000560371 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 ABHD12Q8N2K0 398 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 OR4C13Q8NGP0 309 aa11.59□□□□□ -0.55
TRAF3-208ENST00000560371 WNT9BO14905 357 aa11.58□□□□□ -0.55
TRAF3-208ENST00000560371 PDE6DO43924 150 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms