RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 A0A0B4J2A0 478 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 MSMBP08118 114 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 TRAPPC2P0DI81 140 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 TRAPPC2BP0DI82 140 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 ANXA3P12429 323 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 PRB3Q04118 309 aaPredicted RBP9.93□□□□□ -0.82
HERC1-205ENST00000559886 TMEM187Q14656 261 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 ANKRD55Q3KP44 614 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 SP6Q3SY56 376 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 RPL39P5Q59GN2 51 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 ZNF66Q6ZN08 573 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 C1orf229Q6ZS94 237 aaPredicted RBP9.93□□□□□ -0.82
HERC1-205ENST00000559886 VMO1Q7Z5L0 202 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 BEND2Q8NDZ0 799 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 OR13D1Q8NGV5 346 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
HERC1-205ENST00000559886 HEXA-AS1Q9H8Q6 139 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 RNF212BA8MTL3 300 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 H0Y980 276 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 TOR1AO14656 332 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 B3GALNT1O75752 331 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 ZNF137PP52743 207 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 PRRX1P54821 245 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 PAX8Q06710 450 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 HCP5Q6MZN7 132 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 OR11H6Q8NGC7 330 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 OR51H1Q8NH63 302 aa9.93□□□□□ -0.82
HERC1-205ENST00000559886 TOX4O94842 621 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 COX7A1P24310 79 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 DUTP33316 252 aaKnown RBP9.92□□□□□ -0.82
HERC1-205ENST00000559886 RPL30P62888 115 aaKnown RBP9.92□□□□□ -0.82
HERC1-205ENST00000559886 FCN2Q15485 313 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 PNKDQ8N490 385 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 UXS1Q8NBZ7 420 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 COQ8AQ8NI60 647 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 MSI2Q96DH6 328 aaKnown RBP9.92□□□□□ -0.82
HERC1-205ENST00000559886 S1PR3Q99500 378 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 TMEM222Q9H0R3 208 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 DBX1A6NMT0 343 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 M0R1X1 148 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 UCP1P25874 307 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 CATR1Q13166 79 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 HLA-DRB5Q30154 266 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 LIN54Q6MZP7 749 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 LIAT1Q6ZQX7 453 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 ZNF833PQ6ZTB9 187 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 OR11H7Q8NGC8 314 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 ST6GALNAC6Q969X2 333 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 TBX15Q96SF7 602 aa9.92□□□□□ -0.82
HERC1-205ENST00000559886 LIN7CQ9NUP9 197 aaKnown RBP9.92□□□□□ -0.82
HERC1-205ENST00000559886 CREBBPQ92793 2442 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 TRAV20A0A0B4J274 112 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 LINC00473A8K010 186 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 NCR3LG1Q68D85 454 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 FAM71F2Q6NXP2 309 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 LRTM2Q8N967 370 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 WFDC11Q8NEX6 87 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 TMEM186Q96B77 213 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 PCGF1Q9BSM1 259 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 ITPR3Q14573 2671 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 RNASEK-C17orf49H0YIS7 233 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 CDS2O95674 445 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 ZNF16P17020 682 aaPredicted RBP9.91□□□□□ -0.82
HERC1-205ENST00000559886 HOXB4P17483 251 aaPredicted RBP9.91□□□□□ -0.82
HERC1-205ENST00000559886 CXCL3P19876 107 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 LINC00205P59089 165 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 KLRD1Q13241 179 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 C2orf68Q2NKX9 166 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 TCTEX1D1Q8N7M0 179 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 DRAXINQ8NBI3 349 aaPredicted RBP9.91□□□□□ -0.82
HERC1-205ENST00000559886 MAPK1IP1LQ8NDC0 245 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 OR4P4Q8NGL7 312 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 TCTEX1D2Q8WW35 142 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 TMEM56Q96MV1 263 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 NEURL2Q9BR09 285 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 TMEM56-RWDD3S4R434 201 aa9.91□□□□□ -0.82
HERC1-205ENST00000559886 ODF3BA8MYP8 253 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 BUB1B-PAK6H3BSN5 160 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 HLA-GP17693 338 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 IL3RAP26951 378 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 BRWD1-AS2P59051 145 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 SRPXP78539 464 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 ZNF585BQ52M93 769 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 DCAF12L2Q5VW00 463 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 LGI3Q8N145 548 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 LHFPL5Q8TAF8 219 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 FAM212BQ9NTI7 297 aaPredicted RBP9.9□□□□□ -0.82
HERC1-205ENST00000559886 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 MGAT4CQ9UBM8 478 aa9.9□□□□□ -0.82
HERC1-205ENST00000559886 AMMECR1Q9Y4X0 333 aaPredicted RBP9.9□□□□□ -0.82
HERC1-205ENST00000559886 PFDN1O60925 122 aa9.9□□□□□ -0.83
HERC1-205ENST00000559886 GATA3P23771 443 aa9.9□□□□□ -0.83
HERC1-205ENST00000559886 TMEM249Q2WGJ8 235 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms