RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 LINC01619G3V211 115 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 FCN1O00602 326 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 SAP30O75446 220 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 IRF3Q14653 427 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 RAB11BQ15907 218 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 CD200R1LQ6Q8B3 271 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 FAM89BQ8N5H3 189 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 CASTOR1Q8WTX7 329 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 RNF5Q99942 180 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 C11orf54Q9H0W9 315 aaPredicted RBP11.56□□□□□ -0.56
LRRC28-213ENST00000559399 Q9N2K0 584 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
LRRC28-213ENST00000559399 HSF4Q9ULV5 492 aa11.56□□□□□ -0.56
LRRC28-213ENST00000559399 FOXI3A8MTJ6 420 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 ARL6IP5O75915 188 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 SPDEFO95238 335 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 SCTP09683 121 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 HSMCR30P0CW71 290 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 EGR2P11161 476 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 CPEP16870 476 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 PSMA1P25786 263 aaKnown RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 SLURP1P55000 103 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 TRAM1Q15629 374 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 ACTBL2Q562R1 376 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 TMEM91Q6ZNR0 172 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 PPP1R27Q86WC6 154 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 DRAXINQ8NBI3 349 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 DLX4Q92988 240 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 PTX4Q96A99 478 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 GFI1Q99684 422 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 ZNF221Q9UK13 617 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 TPRKBQ9Y3C4 175 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 AK6Q9Y3D8 172 aaKnown RBP11.55□□□□□ -0.56
LRRC28-213ENST00000559399 NUBP2Q9Y5Y2 271 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 RYR3Q15413 4870 aa11.55□□□□□ -0.56
LRRC28-213ENST00000559399 IGHV4OR15-8A0A075B7B6 117 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 A0A087WW49 117 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 CA2P00918 260 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 CD40LGP29965 261 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 VEGFCP49767 419 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 RPS25P62851 125 aaKnown RBP11.54□□□□□ -0.56
LRRC28-213ENST00000559399 TPBGQ13641 420 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 PSG5Q15238 335 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 AKIRIN2Q53H80 203 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 ZNF562Q6V9R5 426 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 PDPNQ86YL7 162 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 ARHGAP5-AS1Q96IT6 56 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
LRRC28-213ENST00000559399 CMSS1Q9BQ75 279 aaKnown RBP11.54□□□□□ -0.56
LRRC28-213ENST00000559399 GAB2Q9UQC2 676 aa11.54□□□□□ -0.56
LRRC28-213ENST00000559399 RGS10O43665 173 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 APOA2P02652 100 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 IGKV1-16P04430 117 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 TFAP2AP05549 437 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 OR8U9P0C7N5 309 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
LRRC28-213ENST00000559399 RANBP1P43487 201 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 AQP4P55087 323 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 TMEM50BP56557 158 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 CLDN12P56749 244 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 TPPP2P59282 170 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 MLLT11Q13015 90 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-213ENST00000559399 ZNF383Q8NA42 475 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 LFNGQ8NES3 379 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 OR56B1Q8NGI3 324 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 OR6Q1Q8NGQ2 317 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 FLYWCH2Q96CP2 140 aaKnown RBP11.53□□□□□ -0.56
LRRC28-213ENST00000559399 MS4A10Q96PG2 267 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 PECRQ9BY49 303 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 DUSP21Q9H596 190 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 SLA2Q9H6Q3 261 aa11.53□□□□□ -0.56
LRRC28-213ENST00000559399 IGKV1-6A0A0C4DH72 117 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 TRDCB7Z8K6 153 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 PROP1O75360 226 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 SPNP16150 400 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 SERPINB10P48595 397 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 RPS16P62249 146 aaKnown RBP11.52□□□□□ -0.57
LRRC28-213ENST00000559399 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
LRRC28-213ENST00000559399 PITPNAQ00169 270 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 PLAC9Q5JTB6 97 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 ACSM6Q6P461 480 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.52□□□□□ -0.57
LRRC28-213ENST00000559399 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 FAM3DQ96BQ1 224 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 CCDC90BQ9GZT6 254 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 RDH8Q9NYR8 311 aa11.52□□□□□ -0.57
LRRC28-213ENST00000559399 ANKRD65E5RJM6 399 aa11.51□□□□□ -0.57
LRRC28-213ENST00000559399 M0R1X1 148 aa11.51□□□□□ -0.57
LRRC28-213ENST00000559399 ARPC1BO15143 372 aaKnown RBP11.51□□□□□ -0.57
LRRC28-213ENST00000559399 SLC25A17O43808 307 aa11.51□□□□□ -0.57
LRRC28-213ENST00000559399 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
LRRC28-213ENST00000559399 GP9P14770 177 aa11.51□□□□□ -0.57
LRRC28-213ENST00000559399 PSMD7P51665 324 aa11.51□□□□□ -0.57
LRRC28-213ENST00000559399 LINC00205P59089 165 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms