RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 MZT2BQ6NZ67 158 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 C11orf88Q6PI97 169 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 Q6YL49 198 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 ZNF833PQ6ZTB9 187 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 LHFPL4Q7Z7J7 247 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 PRIMA1Q86XR5 153 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 LDLRAD3Q86YD5 345 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 THNSL2Q86YJ6 484 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 SLC38A6Q8IZM9 456 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 BCL6BQ8N143 479 aaPredicted RBP7.47□□□□□ -1.21
LDLR-210ENST00000559340 OR4C16Q8NGL9 310 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 SPATA3Q8NHX4 192 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 SECTM1Q8WVN6 248 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 SSMEM1Q8WWF3 244 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 TRIM63Q969Q1 353 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 ST6GALNAC6Q969X2 333 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 ZNF486Q96H40 463 aaPredicted RBP7.47□□□□□ -1.21
LDLR-210ENST00000559340 ABHD14BQ96IU4 210 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 HSD17B10Q99714 261 aaKnown RBP7.47□□□□□ -1.21
LDLR-210ENST00000559340 SSX3Q99909 188 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 AGMATQ9BSE5 352 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 IFI27L2Q9H2X8 130 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 MCUBQ9NWR8 336 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 PITPNC1Q9UKF7 332 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 POMT1Q9Y6A1 747 aa7.47□□□□□ -1.21
LDLR-210ENST00000559340 SAA2-SAA4A0A096LPE2 208 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 IGHV1-3A0A0C4DH29 117 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 J3QRK9 145 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 M0R1X1 148 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 GPR31O00270 319 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 TCF21O43680 179 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 APOA2P02652 100 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 SAA2P0DJI9 122 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 CD1BP29016 333 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 KIR2DS2P43631 304 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 RAB13P51153 203 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 DEFA1P59665 94 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 DEFA3P59666 94 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 BAMBIQ13145 260 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 CATR1Q13166 79 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 SURF2Q15527 256 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 BAK1Q16611 211 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 ABCA11PQ4W5N1 156 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 ZNF660Q6AZW8 331 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 FAM53AQ6NSI3 398 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 ZNF66Q6ZN08 573 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 LIAT1Q6ZQX7 453 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 SIGLECL1Q8N7X8 197 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 CCDC71LQ8N9Z2 235 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 POC5Q8NA72 575 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 RTN4IP1Q8WWV3 396 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 C22orf15Q8WYQ4 148 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 SDHCQ99643 169 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 SLC6A7Q99884 636 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 SLC25A21Q9BQT8 299 aaPredicted RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 HRASLSQ9HDD0 168 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 RAB18Q9NP72 206 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 SLC2A8Q9NY64 477 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 ZNRD1Q9P1U0 126 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 C14orf166Q9Y224 244 aaKnown RBP7.46□□□□□ -1.22
LDLR-210ENST00000559340 PRELID3BQ9Y3B1 194 aa7.46□□□□□ -1.22
LDLR-210ENST00000559340 OR5H14A6NHG9 310 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 UPK1BO75841 260 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 ZNF735P0CB33 412 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 IER3P46695 156 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 RTL8BQ17RB0 113 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 TUSC1Q2TAM9 212 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 UTF1Q5T230 341 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 C16orf87Q6PH81 154 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 IDO2Q6ZQW0 420 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 LHFPL1Q86WI0 220 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 DRAM1Q8N682 238 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 TCTEX1D1Q8N7M0 179 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 BVESQ8NE79 360 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 OR51S1Q8NGJ8 323 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 OR2T10Q8NGZ9 312 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 OR56B4Q8NH76 319 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 AJUBAQ96IF1 538 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 MDFIQ99750 246 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 RNF5Q99942 180 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 NABP2Q9BQ15 211 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 AIFM2Q9BRQ8 373 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 PARP12Q9H0J9 701 aaKnown RBP7.45□□□□□ -1.22
LDLR-210ENST00000559340 CCL28Q9NRJ3 127 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 SDHAF2Q9NX18 166 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 C1RLQ9NZP8 487 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 JMJD1CQ15652 2540 aa7.45□□□□□ -1.22
LDLR-210ENST00000559340 FBN3Q75N90 2809 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 IGKV1D-13A0A0B4J2D9 117 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 A0A1W2PPI3 338 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 H3BUX3 64 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 CLDN34H7C241 214 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 H7C2Y5 167 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 TRIM77I1YAP6 450 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 TIMM23O14925 209 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 LYRM1O43325 122 aa7.44□□□□□ -1.22
LDLR-210ENST00000559340 B3GALNT1O75752 331 aa7.44□□□□□ -1.22
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