RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 GPX5O75715 221 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 BLVRBP30043 206 aaPredicted RBP5.72□□□□□ -1.49
SPG11-213ENST00000558988 ACTBP60709 375 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 EBI3Q14213 229 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 ECSCRQ19T08 205 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 MORN2Q502X0 79 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 VAX1Q5SQQ9 334 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 GLT8D1Q68CQ7 371 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 TMEM65Q6PI78 240 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 FAM131AQ6UXB0 335 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 GLDNQ6ZMI3 551 aaPredicted RBP5.72□□□□□ -1.49
SPG11-213ENST00000558988 CEACAM19Q7Z692 300 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 FAM71E2Q8N5Q1 922 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 NANOGP1Q8N7R0 232 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 OR2AK2Q8NG84 335 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 OR5M8Q8NGP6 311 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 OR8U1Q8NH10 309 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 MRPL30Q8TCC3 161 aaKnown RBP5.72□□□□□ -1.49
SPG11-213ENST00000558988 CASTOR1Q8WTX7 329 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 TRIM63Q969Q1 353 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 GALMQ96C23 342 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 RITA1Q96K30 269 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 KCTD7Q96MP8 289 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 P2RX4Q99571 388 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 MND1Q9BWT6 205 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 CCDC90BQ9GZT6 254 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 PLGRKTQ9HBL7 147 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 C8orf4Q9NR00 106 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 PLSCR3Q9NRY6 295 aa5.72□□□□□ -1.49
SPG11-213ENST00000558988 SAA2-SAA4A0A096LPE2 208 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 FAM90A10PA6NDY2 464 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 FAM90A7PA6NKC0 464 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 FAM90A23PA8MXZ1 464 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 H7C2Y5 167 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 NBR2O15453 112 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 HSPA12AO43301 675 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 LANCL1O43813 399 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 RGS11O94810 467 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 SPDEFO95238 335 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 CDK1P06493 297 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 ELANEP08246 267 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 SAA2P0DJI9 122 aaPredicted RBP5.71□□□□□ -1.5
SPG11-213ENST00000558988 CHATP28329 748 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 HTR2CP28335 458 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 EGFEM1PQ0D2K5 195 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 SPHARQ15513 63 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 TMEM30BQ3MIR4 351 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 ZNF260Q3ZCT1 412 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 HSD17B12Q53GQ0 312 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 RPL39P5Q59GN2 51 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 OGFRL1Q5TC84 451 aaPredicted RBP5.71□□□□□ -1.5
SPG11-213ENST00000558988 LIPKQ5VXJ0 399 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 LRRTM1Q86UE6 522 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 C8orf31Q8N9H6 132 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 OR11H1Q8NG94 326 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 OR8H1Q8NGG4 311 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 THRSPQ92748 146 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 CLCC1Q96S66 551 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 ASCL2Q99929 193 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 NABP2Q9BQ15 211 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 UQCC2Q9BRT2 126 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 HDHD3Q9BSH5 251 aaPredicted RBP5.71□□□□□ -1.5
SPG11-213ENST00000558988 ANKRD60Q9BZ19 345 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 PARP12Q9H0J9 701 aaKnown RBP5.71□□□□□ -1.5
SPG11-213ENST00000558988 ALX4Q9H161 411 aaPredicted RBP5.71□□□□□ -1.5
SPG11-213ENST00000558988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.71□□□□□ -1.5
SPG11-213ENST00000558988 PLEKHJ1Q9NW61 149 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 SCN3BQ9NY72 215 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 KIAA1456Q9P272 454 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 STEAP1Q9UHE8 339 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 SLC23A1Q9UHI7 598 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 JPT1Q9UK76 154 aa5.71□□□□□ -1.5
SPG11-213ENST00000558988 TRAV41A0A0B4J266 112 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 A0A1W2PN81 502 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 CA11O75493 328 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 SC5DO75845 299 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 GLAP06280 429 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 UBBP0CG47 229 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 SRMP19623 302 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 SLC6A1P30531 599 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 CHRNA7P36544 502 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 CDX1P47902 265 aaPredicted RBP5.7□□□□□ -1.5
SPG11-213ENST00000558988 ZNF137PP52743 207 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 AQP4P55087 323 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 CLDN12P56749 244 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 RPS25P62851 125 aaKnown RBP5.7□□□□□ -1.5
SPG11-213ENST00000558988 RPS27AP62979 156 aaKnown RBP5.7□□□□□ -1.5
SPG11-213ENST00000558988 UNC119Q13432 240 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 Q3ZCU0 254 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 C6orf141Q5SZD1 244 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 C9orf66Q5T8R8 295 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 LIN54Q6MZP7 749 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 CDH26Q8IXH8 852 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 ODF3L1Q8IXM7 274 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 DRAXINQ8NBI3 349 aaPredicted RBP5.7□□□□□ -1.5
SPG11-213ENST00000558988 KCNG3Q8TAE7 436 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 C4orf3Q8WVX3 66 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 UFD1Q92890 307 aa5.7□□□□□ -1.5
SPG11-213ENST00000558988 ABHD14BQ96IU4 210 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms