RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SYNGR2O43760 224 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 S1PR2O95136 353 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 CD5P06127 495 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 SNCAP37840 140 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 ZNF266Q14584 549 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 GUK1Q16774 197 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 SLC25A24Q6NUK1 477 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 THNSL2Q86YJ6 484 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 SPAG16Q8N0X2 631 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 ZNF645Q8N7E2 425 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 FAM57AQ8TBR7 257 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 RSG1Q9BU20 258 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 Q9UFV3 132 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 ZNF737O75373 536 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 CYB5R3P00387 301 aaPredicted RBP8.86□□□□□ -0.99
CUX1-217ENST00000558836 CCKARP32238 428 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 TIMP3P35625 211 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 CEBPGP53567 150 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 WFDC8Q8IUA0 241 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 PSENENQ9NZ42 101 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 HCFC1P51610 2035 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 SRRM5B3KS81 715 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 RBMXL2O75526 392 aaKnown RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 ACAA1P09110 424 aaPredicted RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 GLRXP35754 106 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 DVL1P1P54792 670 aaPredicted RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 NKX6-1P78426 367 aaPredicted RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 STX12Q86Y82 276 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 Q8NA96 180 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 SNRNP40Q96DI7 357 aaKnown RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 MEGF10Q96KG7 1140 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 SEC11CQ9BY50 192 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 GNG12Q9UBI6 72 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 SPTBN1Q01082 2364 aaKnown RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 FAM157AC9JC47 383 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 CD55P08174 381 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 OR13C7P0DN81 318 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 ERVFRD-1P60508 538 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 RPL23AP62750 156 aaKnown RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 CCL8P80075 99 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 OR8G2PQ6IF36 304 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 SPACA3Q8IXA5 215 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 LYPD6BQ8NI32 183 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 NUDT19A8MXV4 375 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 K7N7A8 449 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 CLDN1O95832 211 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 FAM87AP0C7U9 286 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 SFTPCP11686 197 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
CUX1-217ENST00000558836 ZNF134P52741 427 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 C10orf91Q5T1B1 145 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 VKORC1L1Q8N0U8 176 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 PRR7Q8TB68 274 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 CLN8Q9UBY8 286 aa8.85□□□□□ -0.99
CUX1-217ENST00000558836 ODAMA1E959 279 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 C15orf65H3BRN8 121 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 PROP1O75360 226 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 FBP1P09467 338 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 DAOP14920 347 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 CD40P25942 277 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 SULT1A1P50225 295 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 HAGHQ16775 308 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 RPL39P5Q59GN2 51 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 HAPLN4Q86UW8 402 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 SFT2D1Q8WV19 159 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 SFXN3Q9BWM7 321 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 SCRT1Q9BWW7 348 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 VSIRQ9H7M9 311 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 CARHSP1Q9Y2V2 147 aaKnown RBP8.84□□□□□ -0.99
CUX1-217ENST00000558836 DYSFO75923 2080 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 TNCP24821 2201 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 IFNL4K9M1U5 179 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 PRRG2O14669 202 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 SPINT2O43291 252 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 UBE2KP61086 200 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 KRTCAP3Q53RY4 240 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 NCR3LG1Q68D85 454 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 GFRALQ6UXV0 394 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 LSM10Q969L4 123 aaKnown RBP8.84□□□□□ -0.99
CUX1-217ENST00000558836 ATP5SQ99766 215 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 GCM1Q9NP62 436 aa8.84□□□□□ -0.99
CUX1-217ENST00000558836 SNAPINO95295 136 aa8.83□□□□□ -1
CUX1-217ENST00000558836 CD200P41217 278 aa8.83□□□□□ -1
CUX1-217ENST00000558836 RAB40CQ96S21 281 aa8.83□□□□□ -1
CUX1-217ENST00000558836 COL25A1Q9BXS0 654 aaPredicted RBP8.83□□□□□ -1
CUX1-217ENST00000558836 IGHV1-46P01743 117 aa8.83□□□□□ -1
CUX1-217ENST00000558836 TUBG1P23258 451 aa8.83□□□□□ -1
CUX1-217ENST00000558836 TNFAIP6P98066 277 aaPredicted RBP8.83□□□□□ -1
CUX1-217ENST00000558836 TLE1Q04724 770 aa8.83□□□□□ -1
CUX1-217ENST00000558836 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
CUX1-217ENST00000558836 CD300LFQ8TDQ1 290 aa8.83□□□□□ -1
CUX1-217ENST00000558836 CCL13Q99616 98 aa8.83□□□□□ -1
CUX1-217ENST00000558836 RBKSQ9H477 322 aa8.83□□□□□ -1
CUX1-217ENST00000558836 TUBG2Q9NRH3 451 aa8.83□□□□□ -1
CUX1-217ENST00000558836 WSB1Q9Y6I7 421 aa8.83□□□□□ -1
CUX1-217ENST00000558836 SLC31A2O15432 143 aa8.82□□□□□ -1
CUX1-217ENST00000558836 FCGR3BO75015 233 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms