RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 ATP6V0E1O15342 81 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 RPLP1P05386 114 aaKnown RBP12.02□□□□□ -0.49
RPL28-207ENST00000558815 OR8U9P0C7N5 309 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 SERPINB10P48595 397 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 LINC00205P59089 165 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 C5orf64Q2M2E5 130 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 CDNFQ49AH0 187 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 CXorf66Q5JRM2 361 aaPredicted RBP12.02□□□□□ -0.49
RPL28-207ENST00000558815 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 OR8U1Q8NH10 309 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 DUX3Q96PT4 197 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 GINS4Q9BRT9 223 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 OR2D2Q9H210 308 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 GHITMQ9H3K2 345 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 FBXL15Q9H469 300 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 ZFP57Q9NU63 452 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 RBM7Q9Y580 266 aaKnown RBP12.02□□□□□ -0.49
RPL28-207ENST00000558815 NOTCH1P46531 2555 aa12.02□□□□□ -0.49
RPL28-207ENST00000558815 IGKV1D-8A0A087WSZ0 117 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 J3QRK9 145 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 HLA-DRB1P01911 266 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 TFAP2AP05549 437 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 MC5RP33032 325 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 RAB25P57735 213 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 LIN54Q6MZP7 749 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 ETV3LQ6ZN32 361 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 ZNF695Q8IW36 515 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 OR5H6Q8NGV6 325 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 ABHD5Q8WTS1 349 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 NUDCD2Q8WVJ2 157 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 CABLES2Q9BTV7 478 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 ST6GALNAC5Q9BVH7 336 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 VCX3AQ9NNX9 186 aa12.01□□□□□ -0.49
RPL28-207ENST00000558815 TRBV6-7A0A0A0MS04 114 aa12□□□□□ -0.49
RPL28-207ENST00000558815 IGHV7-81A0A0B4J1V7 117 aa12□□□□□ -0.49
RPL28-207ENST00000558815 TMEM235A6NFC5 223 aa12□□□□□ -0.49
RPL28-207ENST00000558815 G3V318 75 aa12□□□□□ -0.49
RPL28-207ENST00000558815 RRHO14718 337 aa12□□□□□ -0.49
RPL28-207ENST00000558815 PROP1O75360 226 aa12□□□□□ -0.49
RPL28-207ENST00000558815 NDUFA3O95167 84 aa12□□□□□ -0.49
RPL28-207ENST00000558815 APOA2P02652 100 aa12□□□□□ -0.49
RPL28-207ENST00000558815 TGFBR1P36897 503 aa12□□□□□ -0.49
RPL28-207ENST00000558815 GNG2P59768 71 aa12□□□□□ -0.49
RPL28-207ENST00000558815 ARL6IP1Q15041 203 aa12□□□□□ -0.49
RPL28-207ENST00000558815 ECSCRQ19T08 205 aa12□□□□□ -0.49
RPL28-207ENST00000558815 DEFB136Q30KP8 78 aa12□□□□□ -0.49
RPL28-207ENST00000558815 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
RPL28-207ENST00000558815 ZNF383Q8NA42 475 aa12□□□□□ -0.49
RPL28-207ENST00000558815 NPBQ8NG41 125 aa12□□□□□ -0.49
RPL28-207ENST00000558815 OR5AN1Q8NGI8 311 aa12□□□□□ -0.49
RPL28-207ENST00000558815 CLCC1Q96S66 551 aa12□□□□□ -0.49
RPL28-207ENST00000558815 OR51J1Q9H342 316 aa12□□□□□ -0.49
RPL28-207ENST00000558815 RHBDL2Q9NX52 303 aa12□□□□□ -0.49
RPL28-207ENST00000558815 A3GALT2U3KPV4 340 aa12□□□□□ -0.49
RPL28-207ENST00000558815 A0A087WXM4 84 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 TNFAIP8O95379 198 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 IGF1P05019 195 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 ELANEP08246 267 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 OR5H8P0DN80 308 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 THBS3P49746 956 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
RPL28-207ENST00000558815 LSM3P62310 102 aaKnown RBP11.99□□□□□ -0.49
RPL28-207ENST00000558815 CFHR3Q02985 330 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 FOXE3Q13461 319 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 KPRPQ5T749 579 aaPredicted RBP11.99□□□□□ -0.49
RPL28-207ENST00000558815 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 LINC00482Q8N8I6 264 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 WFDC9Q8NEX5 89 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 TSPAN14Q8NG11 270 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 SLC35D1Q9NTN3 355 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 SDHAF2Q9NX18 166 aa11.99□□□□□ -0.49
RPL28-207ENST00000558815 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
RPL28-207ENST00000558815 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 RBBP9O75884 186 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 SCGNO76038 276 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 IGHG4P01861 327 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 DTYMKP23919 212 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 NDPQ00604 133 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 TIMM50Q3ZCQ8 353 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 HACD4Q5VWC8 232 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
RPL28-207ENST00000558815 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.98□□□□□ -0.49
RPL28-207ENST00000558815 NECAP2Q9NVZ3 263 aa11.98□□□□□ -0.49
RPL28-207ENST00000558815 TRAV18A0A075B6X5 111 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 FCN1O00602 326 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 AIREO43918 545 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 MYCNOSP40205 109 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 PSG5Q15238 335 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 ZNF260Q3ZCT1 412 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 TMEM65Q6PI78 240 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 PDPNQ86YL7 162 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 SLC25A38Q96DW6 304 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 C5orf30Q96GV9 206 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 RCC1LQ96I51 464 aaKnown RBP11.97□□□□□ -0.49
RPL28-207ENST00000558815 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 OR5B12Q96R08 314 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 TSNAXQ99598 290 aaKnown RBP11.97□□□□□ -0.49
RPL28-207ENST00000558815 FAM103A1Q9BTL3 118 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms