RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CLDN18P56856 261 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 OR10P1Q8NGE3 313 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 PLEK2Q9NYT0 353 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 CLN8Q9UBY8 286 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 ZNF816-ZNF321PA0A0X1KG74 233 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 H0Y8X5 98 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 MPDU1O75352 247 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 TNFSF15O95150 251 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 HLA-DQA1P01909 254 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 PSG2P11465 335 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 SRD5A2P31213 254 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 HINT1P49773 126 aaPredicted RBP13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 CARD18P57730 90 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 KRTAP27-1Q3LI81 207 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 DMRTC1Q5HYR2 192 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 ZNF324BQ6AW86 544 aaPredicted RBP13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 PRR27Q6MZM9 219 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 NPCDR1Q9BY65 106 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 GNB4Q9HAV0 340 aa13.73□□□□□ -0.21
HMBOX1-212ENST00000558662 LILRA5A6NI73 299 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 RBFOX2O43251 390 aaKnown RBP eCLIP13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 DHHO43323 396 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 SCTP09683 121 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 THBS3P49746 956 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 FGF12P61328 243 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 SNAI3Q3KNW1 292 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 Q6ZRM9 215 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 APOBEC3DQ96AK3 386 aaPredicted RBP13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 ARL2-SNX15V9GYD0 113 aa13.72□□□□□ -0.21
HMBOX1-212ENST00000558662 A0A1W2PS18 150 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 SNURFLB1AK76 121 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 EFNA2O43921 213 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 NBEAP1P0C6P0 100 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 C3orf79P0CE67 100 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 ARG2P78540 354 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 HTD2P86397 168 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 TRIM61Q5EBN2 209 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 BRICD5Q6PL45 260 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 RASL11AQ6T310 242 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 SCCPDHQ8NBX0 429 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 GATAD1Q8WUU5 269 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 RDH5Q92781 318 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 C11orf52Q96A22 123 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 CLDN23Q96B33 292 aa13.71□□□□□ -0.21
HMBOX1-212ENST00000558662 CLDN17P56750 224 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 TGFBR3Q03167 851 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 LDLRAD2Q5SZI1 272 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 FAM162BQ5T6X4 162 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 FAM71F2Q6NXP2 309 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 Q6ZSR6 202 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 NIT1Q86X76 327 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 UHRF2Q96PU4 802 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 C1RLQ9NZP8 487 aa13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.22
HMBOX1-212ENST00000558662 TMEM265A0A087WTH1 108 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 IGKV1-5P01602 117 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 LINC00869P0C866 280 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 REG1BP48304 166 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 SELENOVP59797 346 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 CLEC2AQ6UVW9 174 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 C12orf54Q6X4T0 127 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 MOB1BQ7L9L4 216 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 DTX1Q86Y01 620 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 OR4F17Q8NGA8 305 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 ST20Q9HBF5 79 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 CLEC1BQ9P126 229 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 PDE4DIPQ5VU43 2346 aa13.7□□□□□ -0.22
HMBOX1-212ENST00000558662 hCG_38984A0A1B0GV85 526 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 TNFSF12O43508 249 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 SYNGR3O43761 229 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 CLDN1O95832 211 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 CXorf1O96002 111 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 MT-CO2P00403 227 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 IGKV1-39P01597 117 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 IGKV1D-39P04432 117 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 ACRP10323 421 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 HOXB2P14652 356 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 FBLP22087 321 aaKnown RBP13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 FASLGP48023 281 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 CX3CL1P78423 397 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 PLCXD3Q63HM9 321 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 MYPOPQ86VE0 399 aaPredicted RBP13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 YAF2Q8IY57 180 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 ZNF611Q8N823 705 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 OR10G3Q8NGC4 313 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 FAM103A1Q9BTL3 118 aaKnown RBP13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 PPIAL4AQ9Y536 164 aa13.69□□□□□ -0.22
HMBOX1-212ENST00000558662 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
HMBOX1-212ENST00000558662 A0A1W2PPV4 95 aa13.68□□□□□ -0.22
HMBOX1-212ENST00000558662 H0YJW9 148 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms