RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PSMB9P28065 219 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
CSHL1-208ENST00000558609 KIR2DS1Q14954 304 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 ZNF773Q6PK81 442 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 NR2C2APQ86WQ0 139 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 OR4A4PQ8NGN8 299 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 MRAPQ8TCY5 172 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 RNF5Q99942 180 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 GPR61Q9BZJ8 451 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
CSHL1-208ENST00000558609 A0A0B4J203 849 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 METTL21EPA6NDL7 271 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 CCL24O00175 119 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 MFNGO00587 321 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 FABP7O15540 132 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 RBBP9O75884 186 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 FCGR3AP08637 254 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 HIST1H1DP16402 221 aaKnown RBP12.12□□□□□ -0.47
CSHL1-208ENST00000558609 PPIFP30405 207 aaKnown RBP12.12□□□□□ -0.47
CSHL1-208ENST00000558609 RPL5P46777 297 aaKnown RBP12.12□□□□□ -0.47
CSHL1-208ENST00000558609 SERPINB10P48595 397 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 GLDNQ6ZMI3 551 aaPredicted RBP12.12□□□□□ -0.47
CSHL1-208ENST00000558609 RAX2Q96IS3 184 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
CSHL1-208ENST00000558609 TXNL4BQ9NX01 149 aaKnown RBP12.12□□□□□ -0.47
CSHL1-208ENST00000558609 RDH8Q9NYR8 311 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 ZNF221Q9UK13 617 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 RNF150Q9ULK6 438 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 STUB1Q9UNE7 303 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 WASHC3Q9Y3C0 194 aa12.12□□□□□ -0.47
CSHL1-208ENST00000558609 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 RRHO14718 337 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 DIRAS3O95661 229 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 SMIM18P0DKX4 95 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 GNB3P16520 340 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 EGFEM1PQ0D2K5 195 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 TPRA1Q86W33 373 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.11□□□□□ -0.47
CSHL1-208ENST00000558609 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 GAB2Q9UQC2 676 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 WSB1Q9Y6I7 421 aa12.11□□□□□ -0.47
CSHL1-208ENST00000558609 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 G3V318 75 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 H7C2Y5 167 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
CSHL1-208ENST00000558609 GSTT2P0CG29 244 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 GSTT2BP0CG30 244 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 CRIP2P52943 208 aaPredicted RBP12.1□□□□□ -0.47
CSHL1-208ENST00000558609 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 NEDD8Q15843 81 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSHL1-208ENST00000558609 ZNF660Q6AZW8 331 aaPredicted RBP12.1□□□□□ -0.47
CSHL1-208ENST00000558609 Q6ZS49 121 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 DRAXINQ8NBI3 349 aaPredicted RBP12.1□□□□□ -0.47
CSHL1-208ENST00000558609 C4orf3Q8WVX3 66 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 ATG5Q9H1Y0 275 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSHL1-208ENST00000558609 SSR3Q9UNL2 185 aa12.1□□□□□ -0.47
CSHL1-208ENST00000558609 A0A075B6Q4 140 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 TRAV41A0A0B4J266 112 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 SMIM30A4D0T7 59 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 BET1O15155 118 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 TFAP2AP05549 437 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 CX3CL1P78423 397 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
CSHL1-208ENST00000558609 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 IGSF11Q5DX21 431 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 TMEM65Q6PI78 240 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 MINDY2Q8NBR6 621 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 OR10J5Q8NHC4 309 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 KLK15Q9H2R5 256 aa12.09□□□□□ -0.47
CSHL1-208ENST00000558609 ZNF230Q9UIE0 474 aaPredicted RBP12.09□□□□□ -0.47
CSHL1-208ENST00000558609 CCDC160A6NGH7 325 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 FCN1O00602 326 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
CSHL1-208ENST00000558609 TALDO1P37837 337 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 LINC00205P59089 165 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 NDPQ00604 133 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 ARFRP1Q13795 201 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 C19orf54Q5BKX5 351 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 GPR141Q7Z602 305 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 ZNF491Q8N8L2 437 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 DPF1Q92782 380 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 NDUFA13Q9P0J0 144 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.48
CSHL1-208ENST00000558609 DPPA5A6NC42 116 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms