RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PI3P19957 117 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 F2RP25116 425 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 CEACAM3P40198 252 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 RAB25P57735 213 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 BPIFB3P59826 476 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 DHRS2Q13268 280 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 PPP1R1AQ13522 171 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 MIDNQ504T8 468 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 UTF1Q5T230 341 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 TBC1D26Q86UD7 250 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 OR4P4Q8NGL7 312 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 ZNF431Q8TF32 576 aaPredicted RBP12.11□□□□□ -0.47
VPS18-202ENST00000558474 ST6GALNAC6Q969X2 333 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 LIN7CQ9NUP9 197 aaKnown RBP12.11□□□□□ -0.47
VPS18-202ENST00000558474 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 HECTD1Q9ULT8 2610 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 ABCA2Q9BZC7 2435 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 C3orf85A0A1B0GTC6 90 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 A0A1W2PPE3 182 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 LEUTXA8MZ59 168 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 H0Y980 276 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 RNASEK-C17orf49H0YIS7 233 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 ARG1P05089 322 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 HTR1DP28221 377 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
VPS18-202ENST00000558474 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 THBS3P49746 956 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 SUPT4H1P63272 117 aaKnown RBP12.1□□□□□ -0.47
VPS18-202ENST00000558474 SRPXP78539 464 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 ZNF816Q0VGE8 651 aaPredicted RBP12.1□□□□□ -0.47
VPS18-202ENST00000558474 CD300LFQ8TDQ1 290 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 CAPSLQ8WWF8 208 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 C7orf69Q9H7B7 122 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 ALG5Q9Y673 324 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
VPS18-202ENST00000558474 A0A0A6YYJ9 748 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 A0A0B4J293 547 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 PROP1O75360 226 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 GAPDHP04406 335 aaKnown RBP12.09□□□□□ -0.47
VPS18-202ENST00000558474 RPA2P15927 270 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 EPHA1P21709 976 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 VAMP1P23763 118 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 COX7A1P24310 79 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 LGALS4P56470 323 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 COQ8AQ8NI60 647 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 MITD1Q8WV92 249 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 LHX4Q969G2 390 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 C5orf30Q96GV9 206 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 PHB2Q99623 299 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 OR51J1Q9H342 316 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 PRELID3BQ9Y3B1 194 aa12.09□□□□□ -0.47
VPS18-202ENST00000558474 M0R1X1 148 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 RBFOX2O43251 390 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS18-202ENST00000558474 RRASP10301 218 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 UCP1P25874 307 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 CCDC144NLQ6NUI1 221 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 MAPK1IP1LQ8NDC0 245 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 SEC22CQ9BRL7 303 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 BEX2Q9BXY8 128 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 BEX1Q9HBH7 125 aa12.08□□□□□ -0.48
VPS18-202ENST00000558474 CENPVL3A0A0U1RRI6 287 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 TNFSF12O43508 249 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 CDS2O95674 445 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 OR5AC1P0C628 307 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 MC5RP33032 325 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 CBX3Q13185 183 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 KLRD1Q13241 179 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 TMEM187Q14656 261 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 TPTE2P1Q5T6R2 138 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 GPR157Q5UAW9 335 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 SPNS3Q6ZMD2 512 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 LIAT1Q6ZQX7 453 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 LGI3Q8N145 548 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 OR8H3Q8N146 312 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 C12orf45Q8N5I9 185 aaPredicted RBP12.07□□□□□ -0.48
VPS18-202ENST00000558474 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 CHAC2Q8WUX2 184 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 TCTEX1D2Q8WW35 142 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 DDB2Q92466 427 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 RPEQ96AT9 228 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 MALSU1Q96EH3 234 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 TMEM56Q96MV1 263 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 TMEM56-RWDD3S4R434 201 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
VPS18-202ENST00000558474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.485e-7■■■■□ 19.6
VPS18-202ENST00000558474 IGHV1-69DA0A0B4J2H0 117 aa12.06□□□□□ -0.48
VPS18-202ENST00000558474 LINC00473A8K010 186 aa12.06□□□□□ -0.48
VPS18-202ENST00000558474 NPFFO15130 113 aa12.06□□□□□ -0.48
VPS18-202ENST00000558474 ATG12O94817 140 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms