RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LAMB1P07942 1786 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 OR4C45A6NMZ5 311 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 HLA-DRB1P01911 266 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 MESP2Q0VG99 397 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 HIST1H2BAQ96A08 127 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 C16orf92Q96LL3 132 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 HSPB7Q9UBY9 170 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 PSG6Q00889 435 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 PRSS27Q9BQR3 290 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 TMEM160Q9NX00 188 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 CA1P00915 261 aaPredicted RBP12.09□□□□□ -0.47
SPG11-210ENST00000558319 AGAP20933 346 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 PMS2CLQ68D20 193 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 STXBP6Q8NFX7 210 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 BRWD1Q9NSI6 2320 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 FHITP49789 147 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
SPG11-210ENST00000558319 MTURNQ8N3F0 131 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 OR6X1Q8NH79 312 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 LINC00470Q9BZP3 86 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 MAST2Q6P0Q8 1798 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 PGPA6NDG6 321 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 PPP1R17O96001 155 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 IRF3Q14653 427 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 OR52M1Q8NGK5 317 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 NUDT11Q96G61 164 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 RBKSQ9H477 322 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 MRPL16Q9NX20 251 aaKnown RBP12.09□□□□□ -0.47
SPG11-210ENST00000558319 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
SPG11-210ENST00000558319 CCDC88CQ9P219 2028 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 C16orf97H3BN30 126 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 NANOS3P60323 173 aaKnown RBP12.08□□□□□ -0.48
SPG11-210ENST00000558319 ZNF362Q5T0B9 420 aaPredicted RBP12.08□□□□□ -0.48
SPG11-210ENST00000558319 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 VKORC1L1Q8N0U8 176 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 OR11H4Q8NGC9 324 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 ZIC1Q15915 447 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 Q5BKY6 102 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 LIPT2A6NK58 231 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 TMEM262E9PQX1 116 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
SPG11-210ENST00000558319 RND3P61587 244 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 TMEM177Q53S58 311 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 TRAV8-6A0A0B4J262 113 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 CEACAM18A8MTB9 384 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 UPK3AO75631 287 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 ARL14EPLP0DKL9 152 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
SPG11-210ENST00000558319 MEIG1Q5JSS6 88 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 MBNL2Q5VZF2 373 aaKnown RBP12.08□□□□□ -0.48
SPG11-210ENST00000558319 WIPI2Q9Y4P8 454 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 EGR1P18146 543 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 GPR6P46095 362 aaPredicted RBP12.08□□□□□ -0.48
SPG11-210ENST00000558319 GAB4Q2WGN9 574 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 C9orf40Q8IXQ3 194 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 OR13C6PQ8NH95 151 aa12.08□□□□□ -0.48
SPG11-210ENST00000558319 DLX6P56179 175 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 HOGA1Q86XE5 327 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 OR1L8Q8NGR8 309 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 C18orf15Q96N68 181 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 A0A1B0GWB2 263 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 HYPMO75409 117 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 LINC01560Q8TB33 94 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 SSBP3Q9BWW4 388 aaPredicted RBP12.07□□□□□ -0.48
SPG11-210ENST00000558319 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 NPVFQ9HCQ7 196 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 FCGR3AP08637 254 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 C7orf66A4D0T2 115 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 KIR3DL2P43630 455 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 RPL31P62899 125 aaKnown RBP12.07□□□□□ -0.48
SPG11-210ENST00000558319 SAMD13Q5VXD3 122 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 CLEC2AQ6UVW9 174 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 SRSF12Q8WXF0 261 aaKnown RBP12.07□□□□□ -0.48
SPG11-210ENST00000558319 PEF1Q9UBV8 284 aaKnown RBP12.07□□□□□ -0.48
SPG11-210ENST00000558319 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 IGHV3OR16-8A0A075B7F1 116 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 HTN3P15516 51 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 CBLN1P23435 193 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 STPG1Q5TH74 334 aa12.07□□□□□ -0.48
SPG11-210ENST00000558319 METTL1Q9UBP6 276 aaKnown RBP12.07□□□□□ -0.48
SPG11-210ENST00000558319 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
SPG11-210ENST00000558319 A0A1W2PP11 408 aa12.06□□□□□ -0.48
SPG11-210ENST00000558319 FCARP24071 287 aa12.06□□□□□ -0.48
SPG11-210ENST00000558319 PEBP1P30086 187 aaKnown RBP12.06□□□□□ -0.48
SPG11-210ENST00000558319 RAC3P60763 192 aa12.06□□□□□ -0.48
SPG11-210ENST00000558319 DCAF10Q5QP82 559 aa12.06□□□□□ -0.48
SPG11-210ENST00000558319 PEAR1Q5VY43 1037 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms