RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 TFAP2AP05549 437 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 HSMCR30P0CW71 290 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 RAB11BQ15907 218 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 LIPKQ5VXJ0 399 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 UNQ5815/PRO19632Q6UWF5 114 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 OR56B1Q8NGI3 324 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 OR6Q1Q8NGQ2 317 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 TMEM203Q969S6 136 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 PTX4Q96A99 478 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 TOLLIPQ9H0E2 274 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 LPAR5Q9H1C0 372 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 METTL1Q9UBP6 276 aaKnown RBP10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 LSM2Q9Y333 95 aaKnown RBP10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 FCN1O00602 326 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 SOCS1O15524 211 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 SPDEFO95238 335 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 APOA2P02652 100 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 HSPB1P04792 205 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 LGALS1P09382 135 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 OR8U9P0C7N5 309 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 SERPINB10P48595 397 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 RPS16P62249 146 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 HLA-DRB3P79483 266 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 TPBGQ13641 420 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 P2RY14Q15391 338 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 GLDNQ6ZMI3 551 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 ASCL2Q99929 193 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 CMSS1Q9BQ75 279 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 ELOVL1Q9BW60 279 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 Q9N2K0 584 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 ISYNA1Q9NPH2 558 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 SORL1Q92673 2214 aa10.54□□□□□ -0.72
SNRPA1-204ENST00000558020 TRDCB7Z8K6 153 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 C3orf84H3BNL1 204 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 SOX15O60248 233 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 VEGFCP49767 419 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 TPPP2P59282 170 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 PITPNAQ00169 270 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 PSG5Q15238 335 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 PDPNQ86YL7 162 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 DRAXINQ8NBI3 349 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 LFNGQ8NES3 379 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 CLCC1Q96S66 551 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 CENPOQ9BU64 300 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 ACOT13Q9NPJ3 140 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 OR1A1Q9P1Q5 309 aa10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 AK6Q9Y3D8 172 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-204ENST00000558020 DNAH9Q9NYC9 4486 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 A0A0A6YYD4 124 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 A0A0G2JLM5 398 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 DENRO43583 198 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 RGS10O43665 173 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 CNIH1O95406 144 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 TRGV3P03979 118 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 SCTP09683 121 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 LGALS7P47929 136 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 SLURP1P55000 103 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 NDPQ00604 133 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 TAGLNQ01995 201 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 CBX3Q13185 183 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 IRF3Q14653 427 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 C2orf76Q3KRA6 126 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 OR4A4PQ8NGN8 299 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 ARPC1AQ92747 370 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 FAM3DQ96BQ1 224 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 ARHGAP5-AS1Q96IT6 56 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 MS4A10Q96PG2 267 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 HDHD3Q9BSH5 251 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 CCDC90BQ9GZT6 254 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 ALX4Q9H161 411 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 KCNK15Q9H427 330 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 DUSP21Q9H596 190 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 RAB22AQ9UL26 194 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 FBXO7Q9Y3I1 522 aa10.52□□□□□ -0.73
SNRPA1-204ENST00000558020 C13orf42A0A1B0GVH6 325 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 CA2P00918 260 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 CD3GP09693 182 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 SPNP16150 400 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 ZP3P21754 424 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 CALRP27797 417 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 TMEM50BP56557 158 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 MLLT11Q13015 90 aaPredicted RBP10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 FXYD3Q14802 87 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 TMEM91Q6ZNR0 172 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 OR10J5Q8NHC4 309 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 CASTOR1Q8WTX7 329 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 TMEM68Q96MH6 324 aa10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 FAM103A1Q9BTL3 118 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-204ENST00000558020 PECRQ9BY49 303 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms