RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IFNA1P01562 189 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 OPN1SWP03999 348 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 GYPCP04921 128 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 HLA-DQB2P05538 268 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 CISD3P0C7P0 127 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 LINC00869P0C866 280 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 KCNE1P15382 129 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 NTF3P20783 257 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 CCL1P22362 96 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 PPP1CCP36873 323 aaKnown RBP2.48□□□□□ -2.01
TDP1-217ENST00000557782 MPV17P39210 176 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 CRYBA4P53673 196 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 CAV1Q03135 178 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 ENDOGQ14249 297 aaKnown RBP2.48□□□□□ -2.01
TDP1-217ENST00000557782 MOGQ16653 247 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 Q5W150 140 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 TMEM144Q7Z5S9 345 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 LRP11Q86VZ4 500 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 OOSP2Q86WS3 158 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 BAP18Q8IXM2 172 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 SLC35F6Q8N357 371 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 ZNF433Q8N7K0 673 aaPredicted RBP2.48□□□□□ -2.01
TDP1-217ENST00000557782 OR51A2Q8NGJ7 313 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 RASSF5Q8WWW0 418 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 MAL2Q969L2 176 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 ZHX1-C8orf76Q96EF9 292 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 PYURFQ96I23 114 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 RNF5Q99942 180 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 C1orf50Q9BV19 199 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 ANGPT4Q9Y264 503 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 CDC42BPBQ9Y5S2 1711 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 DOCK5Q9H7D0 1870 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 IGHV1-69-2A0A0G2JMI3 117 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 LINC00862A6NCI5 91 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 OR6C6A6NF89 314 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 FAM159BA6NKW6 160 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 KNCNA6PVL3 124 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 IGLL5B9A064 214 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 PANO1I0J062 215 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 FAAHO00519 579 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 ATG12O94817 140 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 PDYNP01213 254 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 SERPINA7P05543 415 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 ESDP10768 282 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 CD34P28906 385 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 OPRM1P35372 400 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 TGFBR1P36897 503 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 AKR1C2P52895 323 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 TCTAP57738 103 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 LINC00313P59037 77 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 TAS2R41P59536 307 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 TFAMQ00059 246 aaKnown RBP2.47□□□□□ -2.01
TDP1-217ENST00000557782 HOXC5Q00444 222 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 DEFA6Q01524 100 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 LCE1DQ5T752 114 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 OR2T4Q8NH00 348 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 DYDC1Q8WWB3 177 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 CPNE2Q96FN4 548 aaPredicted RBP2.47□□□□□ -2.01
TDP1-217ENST00000557782 FOPNLQ96NB1 174 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 BIN3Q9NQY0 253 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 C8orf4Q9NR00 106 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 C19orf12Q9NSK7 152 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 IDI2-AS1Q9NZ38 188 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 ANAPC10Q9UM13 185 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 PIK3C2GO75747 1445 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 DCCP43146 1447 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 MEGF6O75095 1541 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 THSD7AQ9UPZ6 1657 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 CHD5Q8TDI0 1954 aa2.47□□□□□ -2.01
TDP1-217ENST00000557782 CABIN1Q9Y6J0 2220 aa2.46□□□□□ -2.01
TDP1-217ENST00000557782 WRNQ14191 1432 aaPredicted RBP eCLIP2.46□□□□□ -2.02
TDP1-217ENST00000557782 IGKV3D-20A0A0C4DH25 116 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 hADV38S2A0JD32 116 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 INMT-MINDY4F8WBC2 141 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 FSTL3O95633 263 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 IFNA21P01568 189 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 IGHG2P01859 326 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 IGHMP01871 453 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 CRYGDP07320 174 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 IFI30P13284 250 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 RPL5P46777 297 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 NOVP48745 357 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 ZNF133P52736 654 aaPredicted RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 SNRPD2P62316 118 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 GNA12Q03113 381 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 PDGFRLQ15198 375 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 TSNQ15631 228 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 ALX1Q15699 326 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 SPINK14Q6IE38 97 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 C3orf33Q6P1S2 294 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 DAZ4Q86SG3 579 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 ANKRD29Q8N6D5 301 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 ZFP62Q8NB50 900 aaPredicted RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 OR13C6PQ8NH95 151 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 RBPMSQ93062 196 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 C12orf43Q96C57 262 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 GNPNAT1Q96EK6 184 aaPredicted RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 CNBD2Q96M20 576 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms