RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LCN2P80188 198 aa9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 Q8IYB0 196 aa9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 APH1AQ96BI3 265 aa9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 BTF3L4Q96K17 158 aa9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 CLN8Q9UBY8 286 aa9.96□□□□□ -0.81
VIPAS39-211ENST00000557658 LRRC30A6NM36 301 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 TCAPO15273 167 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 KRASP01116 189 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 PLA2G5P39877 138 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 WNT5AP41221 380 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 LHX2P50458 406 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 PMP22Q01453 160 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 PAX5Q02548 391 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 RTL8AQ9BWD3 113 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 NPCDR1Q9BY65 106 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 OR51B6Q9H340 312 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 MBNL3Q9NUK0 354 aaKnown RBP9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 WIPI2Q9Y4P8 454 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 MED12LQ86YW9 2145 aa9.96□□□□□ -0.82
VIPAS39-211ENST00000557658 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 C11orf94C9JXX5 98 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 C17orf112F2Z3M2 114 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 NTN3O00634 580 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 G6PCP35575 357 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 TFF3Q07654 80 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 GBGT1Q8N5D6 347 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 ZNF645Q8N7E2 425 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 OR5T1Q8NG75 326 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 MRPL37Q9BZE1 423 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 ODAMA1E959 279 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 PMS2P5A8MQ11 134 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 SERPINA7P05543 415 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 CD99P14209 185 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 CHRNA7P36544 502 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 GNB2P62879 340 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 FAM78BQ5VT40 261 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 MYPOPQ86VE0 399 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 CIB3Q96Q77 187 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 NEU1Q99519 415 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 KCNIP1Q9NZI2 227 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 POLDIP2Q9Y2S7 368 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 DOCK11Q5JSL3 2073 aa9.95□□□□□ -0.82
VIPAS39-211ENST00000557658 RAMP3O60896 148 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 PDGFBP01127 241 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 OR4A8P0C604 315 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 P0C879 139 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 RAC2P15153 192 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 IL3RAP26951 378 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 CDC34P49427 236 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 CLDN18P56856 261 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 PPP1CBP62140 327 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 ZNF816Q0VGE8 651 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 CATR1Q13166 79 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 UBE2ZQ9H832 354 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 B4GALT7Q9UBV7 327 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 WASF3Q9UPY6 502 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 DOCK10Q96BY6 2186 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 C1QTNF9BB2RNN3 333 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 SH2D1BO14796 132 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 MLNRO43193 412 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 PDE6DO43924 150 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 IGFBP7Q16270 282 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 VWC2Q2TAL6 325 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 SPINK14Q6IE38 97 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 FAM173AQ9BQD7 235 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 OR2D2Q9H210 308 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 FKBP11Q9NYL4 201 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 PILRBQ9UKJ0 227 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
VIPAS39-211ENST00000557658 CFAP54Q96N23 3096 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 A0A0U1RQK1 487 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 ZNF320A2RRD8 509 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 EREGO14944 169 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 ZG16O60844 167 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 NXPH2O95156 264 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 SCGB1D1O95968 90 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 NPPCP23582 126 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 DUSP3P51452 185 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 ERVK11-1P61568 191 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 NUFIP2Q7Z417 695 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 SCCPDHQ8NBX0 429 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 OR2M7Q8NG81 312 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 ZNF703Q9H7S9 590 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 USF3Q68DE3 2245 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 S1PR2O95136 353 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 CFIP05156 583 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 CELA3AP09093 270 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 MPLP40238 635 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 RPL15P61313 204 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 RPL30P62888 115 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 ZNF146Q15072 292 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 PRSS8Q16651 343 aa9.93□□□□□ -0.82
VIPAS39-211ENST00000557658 SPATA46Q5T0L3 261 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms