RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 RAB18Q9NP72 206 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 COMMD9Q9P000 198 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 KAAG1Q9UBP8 84 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 U3KQ87 197 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 K7EIL1 84 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 GPR37O15354 613 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 IGHV4-59P01825 116 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 SELLP14151 372 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 S100A1P23297 94 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
SHMT2-230ENST00000557427 GSG1LQ6UXU4 331 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 PDZD9Q8IXQ8 264 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 BATF2Q8N1L9 274 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 SSMEM1Q8WWF3 244 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 H1FXQ92522 213 aaKnown RBP10.17□□□□□ -0.78
SHMT2-230ENST00000557427 MOB3AQ96BX8 217 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF488Q96MN9 340 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 PDCD10Q9BUL8 212 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 NMES1Q9C002 83 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 CHMP1AQ9HD42 196 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-230ENST00000557427 IL36RNQ9UBH0 155 aa10.17□□□□□ -0.78
SHMT2-230ENST00000557427 SACSQ9NZJ4 4579 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 FXYD6-FXYD2A0A087WZ82 144 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 CRYM-AS1A6NIL9 109 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 CCSO14618 274 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 ARPC5O15511 151 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 NOS1APO75052 506 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-230ENST00000557427 MPC2O95563 127 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 IFNA7P01567 189 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 PGA5P0DJD9 388 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF728P0DKX0 622 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 NDUFB7P17568 137 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 PI3P19957 117 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 S100A11P31949 105 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 KIR2DS4P43632 304 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 PRB3Q04118 309 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-230ENST00000557427 KIR2DS1Q14954 304 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 GPR157Q5UAW9 335 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 STUMQ69YW2 141 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 Q6P435 159 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF880Q6PDB4 577 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 TMUB2Q71RG4 321 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 KCTD9Q7L273 389 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 SGPP2Q8IWX5 399 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 SUMF2Q8NBJ7 301 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF680Q8NEM1 530 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 ANGPTL6Q8NI99 470 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 LHX4Q969G2 390 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 NRIP2Q9BQI9 281 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 DPCDQ9BVM2 203 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-230ENST00000557427 ONECUT1Q9UBC0 465 aa10.16□□□□□ -0.78
SHMT2-230ENST00000557427 RPUSD1Q9UJJ7 312 aaKnown RBP10.16□□□□□ -0.78
SHMT2-230ENST00000557427 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 NKX6-3A6NJ46 265 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 DEGS1O15121 323 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 CTXN2P0C2S0 81 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 PSG2P11465 335 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 FCGR2CP31995 323 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 HTR2BP41595 481 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF345Q14585 488 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF788Q6ZQV5 615 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 SLC38A6Q8IZM9 456 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 POC1AQ8NBT0 407 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 NEK7Q8TDX7 302 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 GAFA1Q96PS6 74 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.78
SHMT2-230ENST00000557427 SLC25A10Q9UBX3 287 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-230ENST00000557427 IGKV1D-17A0A075B6S4 117 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 A0A0D9SG52 128 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 C5orf51A6NDU8 294 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 TRDCB7Z8K6 153 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 TSPAN9O75954 239 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 MMP9P14780 707 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 IER3P46695 156 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 BPIFB3P59826 476 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 HERV-K104P61576 105 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 ZNF146Q15072 292 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 SPIN3Q5JUX0 258 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 ZNF546Q86UE3 836 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 ZNRF1Q8ND25 227 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 LY6G5BQ8NDX9 201 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
SHMT2-230ENST00000557427 PPP1R1CQ8WVI7 109 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 GALNT14Q96FL9 552 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 SEC22AQ96IW7 307 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 C2orf50Q96LR7 162 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 DCTN5Q9BTE1 182 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 MFFQ9GZY8 342 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 SIRPDQ9H106 197 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 HES4Q9HCC6 221 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 RASL12Q9NYN1 266 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 TNFSF18Q9UNG2 199 aa10.14□□□□□ -0.79
SHMT2-230ENST00000557427 MAB21L2Q9Y586 359 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms