RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 DTYMKP23919 212 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 S100A5P33763 92 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 OR3A3P47888 321 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 SRSF7Q16629 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS33B-206ENST00000557358 MOGAT2Q3SYC2 334 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 CDNFQ49AH0 187 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 LAX1Q8IWV1 398 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 Q8N6K4 173 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 SLC25A38Q96DW6 304 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 CMTM3Q96MX0 182 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 NABP2Q9BQ15 211 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 C11orf54Q9H0W9 315 aaPredicted RBP10.97□□□□□ -0.65
VPS33B-206ENST00000557358 ABCG5Q9H222 651 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 IFI27L2Q9H2X8 130 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 RDH8Q9NYR8 311 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 A0A0A6YYH2 397 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 A6NJ64 397 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 CTDSP2O14595 271 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 RBBP9O75884 186 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 TSPAN15O95858 294 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 IGHG2P01859 326 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 APOA1P02647 267 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 APOA2P02652 100 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 OR5H8P0DN80 308 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 ACTBP60709 375 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 PLA2G7Q13093 441 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 PLGLAQ15195 96 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 PNLIPRP3Q17RR3 467 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 HACD4Q5VWC8 232 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.65
VPS33B-206ENST00000557358 OR6Q1Q8NGQ2 317 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 MIXL1Q9H2W2 232 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS33B-206ENST00000557358 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 KCNK7Q9Y2U2 307 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 WASHC3Q9Y3C0 194 aa10.96□□□□□ -0.65
VPS33B-206ENST00000557358 A0A1W2PRX2 142 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 FAM25AB3EWG3 89 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 FAM25CB3EWG5 89 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 FAM25GB3EWG6 89 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF736B4DX44 427 aaPredicted RBP10.95□□□□□ -0.66
VPS33B-206ENST00000557358 NBR2O15453 112 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 PF4P02776 101 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 EIF4EP06730 217 aaKnown RBP10.95□□□□□ -0.66
VPS33B-206ENST00000557358 ELK1P19419 428 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 VDAC1P21796 283 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 CD83Q01151 205 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 Q6ZS49 121 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 ODF3L1Q8IXM7 274 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 Q8N9W7 124 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 ABHD14BQ96IU4 210 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 RNF5Q99942 180 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 CABLES2Q9BTV7 478 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 ST6GALNAC5Q9BVH7 336 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF107Q9UII5 783 aaPredicted RBP10.95□□□□□ -0.66
VPS33B-206ENST00000557358 RNF150Q9ULK6 438 aa10.95□□□□□ -0.66
VPS33B-206ENST00000557358 TRRAPQ9Y4A5 3859 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 GSTT2P0CG29 244 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 GSTT2BP0CG30 244 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
VPS33B-206ENST00000557358 FBLN7Q53RD9 439 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 RPL39P5Q59GN2 51 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 FAM131AQ6UXB0 335 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 Q6ZPA2 131 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 LINC00299Q6ZSB3 139 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 STPG2Q8N412 459 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 WIPF2Q8TF74 440 aaPredicted RBP10.94□□□□□ -0.66
VPS33B-206ENST00000557358 S100A16Q96FQ6 103 aaKnown RBP10.94□□□□□ -0.66
VPS33B-206ENST00000557358 CYYR1Q96J86 154 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 TSNAXQ99598 290 aaKnown RBP10.94□□□□□ -0.66
VPS33B-206ENST00000557358 ZFP57Q9NU63 452 aa10.94□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF230Q9UIE0 474 aaPredicted RBP10.94□□□□□ -0.66
VPS33B-206ENST00000557358 TRAV18A0A075B6X5 111 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 TRBV6-7A0A0A0MS04 114 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 TMEM235A6NFC5 223 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 NUDT19A8MXV4 375 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 M0R1X1 148 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 OR8U9P0C7N5 309 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 SLC6A1P30531 599 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 TNFSF8P32971 234 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 F2RL1P55085 397 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 IGSF11Q5DX21 431 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 CXorf66Q5JRM2 361 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-206ENST00000557358 LIN54Q6MZP7 749 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 CNIH2Q6PI25 160 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF329Q86UD4 541 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 PDPNQ86YL7 162 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 FAM71E2Q8N5Q1 922 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 OR8U1Q8NH10 309 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 MAFIPQ8WZ33 124 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 DIRAS2Q96HU8 199 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 ADTRPQ96IZ2 230 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 AGMATQ9BSE5 352 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 OR2D2Q9H210 308 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 EXTL2Q9UBQ6 330 aa10.93□□□□□ -0.66
VPS33B-206ENST00000557358 SLC22A5O76082 557 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms