RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SLC23A1Q9UHI7 598 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 RAB22AQ9UL26 194 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 TET2Q6N021 2002 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF736B4DX44 427 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 H7C2Y5 167 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 NAPSAO96009 420 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ELANEP08246 267 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 CD37P11049 281 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 SLC2A2P11168 524 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 IGLL1P15814 213 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 CD40LGP29965 261 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 MAP2K4P45985 399 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 F2RL1P55085 397 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ACTBP60709 375 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 RPL23AP62750 156 aaKnown RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 FABP5Q01469 135 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ARL6IP1Q15041 203 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 HMGN3Q15651 99 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 FBLN7Q53RD9 439 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 FAM53AQ6NSI3 398 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 FAM71F2Q6NXP2 309 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 C10orf99Q6UWK7 81 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 FAM89BQ8N5H3 189 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 Q8N6K4 173 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 Q8N9W7 124 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 KLHL30-AS1Q8NEE0 82 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 MRAPQ8TCY5 172 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 NICN1Q9BSH3 213 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 LPAR5Q9H1C0 372 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF107Q9UII5 783 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF221Q9UK13 617 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 PRKDCP78527 4128 aaKnown RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 A0A087WWL8 130 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 TRBV6-6A0A0A6YYG2 114 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 TRAV1-2A0A0B4J238 106 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 OR5H14A6NHG9 310 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 SOCS1O15524 211 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 IGF1P05019 195 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 CD3GP09693 182 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 GALP22466 123 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 TALDO1P37837 337 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 MYCNOSP40205 109 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 SERPINB10P48595 397 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 RAB25P57735 213 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 QRFPP83859 136 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 TMEM267Q0VDI3 215 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-222ENST00000556768 FOXE3Q13461 319 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 GNMTQ14749 295 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 KIR2DS1Q14954 304 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF833PQ6ZTB9 187 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 FAM71E2Q8N5Q1 922 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 OR8U1Q8NH10 309 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 RAB3CQ96E17 227 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 ARHGAP5-AS1Q96IT6 56 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 C11orf54Q9H0W9 315 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-222ENST00000556768 PLSCR3Q9NRY6 295 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 AK3Q9UIJ7 227 aa5.77□□□□□ -1.49
SCFD1-222ENST00000556768 SAA2-SAA4A0A096LPE2 208 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 IFITM5A6NNB3 132 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 TRDCB7Z8K6 153 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 ITGB1BP1O14713 200 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 NBR2O15453 112 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 RBBP9O75884 186 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 PRB2P02812 416 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 SAA2P0DJI9 122 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 RAB3BP20337 219 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 OR3A3P47888 321 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 CDX1P47902 265 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 THBS3P49746 956 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 CLDN12P56749 244 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 GABARAPL2P60520 117 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 CBX3Q13185 183 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 DCTN2Q13561 401 aaKnown RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 HES5Q5TA89 166 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF880Q6PDB4 577 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 OR10J5Q8NHC4 309 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 FCGR1BQ92637 280 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 RNF5Q99942 180 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 NABP2Q9BQ15 211 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 MRPL20Q9BYC9 149 aaKnown RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 YTHDF1Q9BYJ9 559 aaKnown RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 NDUFB11Q9NX14 153 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 RNF150Q9ULK6 438 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 RBM7Q9Y580 266 aaKnown RBP5.76□□□□□ -1.49
SCFD1-222ENST00000556768 TRDV1A0A1B0GX56 115 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 LINC01548A6NM66 108 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 CCL24O00175 119 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 ATP6V1G2O95670 118 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 IGHG4P01861 327 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 HLA-DRB1P01911 266 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 PSMB9P28065 219 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 TMEM50BP56557 158 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 HLA-DRB3P79483 266 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 ARFRP1Q13795 201 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 C5orf64Q2M2E5 130 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 DEFB121Q5J5C9 76 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 LCNL1Q6ZST4 164 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 OR4A4PQ8NGN8 299 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 KCTD7Q96MP8 289 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 PECRQ9BY49 303 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms