RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 NDPQ00604 133 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 GNMTQ14749 295 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 PLGLAQ15195 96 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 AKIRIN2Q53H80 203 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 ACTBL2Q562R1 376 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 CD200R1LQ6Q8B3 271 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 ZNF833PQ6ZTB9 187 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 PPP1R27Q86WC6 154 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 ABHD5Q8WTS1 349 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 RAB2BQ8WUD1 216 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 RGP1Q92546 391 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-223ENST00000556689 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
SHMT2-223ENST00000556689 BCL7BQ9BQE9 202 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 MBNL3Q9NUK0 354 aaKnown RBP9.7□□□□□ -0.86
SHMT2-223ENST00000556689 JPT1Q9UK76 154 aa9.7□□□□□ -0.86
SHMT2-223ENST00000556689 LOC100506127A0A0U1RQW1 187 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 H0Y980 276 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 FCN1O00602 326 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 RRHO14718 337 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 YPEL1O60688 119 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 RGS11O94810 467 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 TFAP2AP05549 437 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 PPP1CCP36873 323 aaKnown RBP9.69□□□□□ -0.86
SHMT2-223ENST00000556689 OR3A3P47888 321 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 ALDH3B2P48448 385 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 TPPP2P59282 170 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 HTD2P86397 168 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 Q499Y3 187 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 LY6G6FQ5SQ64 297 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 UNQ5815/PRO19632Q6UWF5 114 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 ZNF554Q86TJ5 538 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 CLVS1Q8IUQ0 354 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-223ENST00000556689 PHYHIPQ92561 330 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 TMEM203Q969S6 136 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 YPEL2Q96QA6 119 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 FBXL15Q9H469 300 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 SLA2Q9H6Q3 261 aa9.69□□□□□ -0.86
SHMT2-223ENST00000556689 RANGRFQ9HD47 186 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-223ENST00000556689 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
SHMT2-223ENST00000556689 UBE2QL1A1L167 161 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 SC5DO75845 299 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 LALBAP00709 142 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 GLAP06280 429 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 GSTP1P09211 210 aaKnown RBP9.68□□□□□ -0.86
SHMT2-223ENST00000556689 FUT3P21217 361 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 ZP3P21754 424 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 TMBIM6P55061 237 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 RPS25P62851 125 aaKnown RBP9.68□□□□□ -0.86
SHMT2-223ENST00000556689 GPR107Q5VW38 600 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 GLIPR1L1Q6UWM5 242 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 ZNF562Q6V9R5 426 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 C5orf24Q7Z6I8 188 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 LFNGQ8NES3 379 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 GALMQ96C23 342 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 PGLYRP3Q96LB9 341 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 KRTAP17-1Q9BYP8 105 aa9.68□□□□□ -0.86
SHMT2-223ENST00000556689 SAA2-SAA4A0A096LPE2 208 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 FAM90A7PA6NKC0 464 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 FAM90A23PA8MXZ1 464 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 PDCD5O14737 125 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 SLC22A1O15245 554 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 TRGV3P03979 118 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 MAS1P04201 325 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 SAA2P0DJI9 122 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-223ENST00000556689 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-223ENST00000556689 GADD45AP24522 165 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 KLF5Q13887 457 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-223ENST00000556689 SSX1Q16384 188 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 HSD17B12Q53GQ0 312 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 FAM71F2Q6NXP2 309 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 FAM131AQ6UXB0 335 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 CEACAM19Q7Z692 300 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 OR2AK2Q8NG84 335 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 ORAI1Q96D31 301 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 OR14A2Q96R54 314 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 CLCC1Q96S66 551 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 FAM103A1Q9BTL3 118 aaKnown RBP9.67□□□□□ -0.86
SHMT2-223ENST00000556689 SELENOIQ9C0D9 397 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 BANF2Q9H503 90 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 PIPOXQ9P0Z9 390 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 GAB2Q9UQC2 676 aa9.67□□□□□ -0.86
SHMT2-223ENST00000556689 C13orf42A0A1B0GVH6 325 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 TRDV1A0A1B0GX56 115 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 ZNF701M0R085 212 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-223ENST00000556689 RAB29O14966 203 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 GPX5O75715 221 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 GABARAPO95166 117 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 CT45A6P0DMU7 189 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 CT45A5P0DMU8 189 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 CT45A7P0DMV0 189 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 CALRP27797 417 aaKnown RBP9.66□□□□□ -0.86
SHMT2-223ENST00000556689 MC5RP33032 325 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 ACSM3Q53FZ2 586 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 IL34Q6ZMJ4 242 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 NKAIN3Q8N8D7 197 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 OR9G4Q8NGQ1 327 aa9.66□□□□□ -0.86
SHMT2-223ENST00000556689 MRPL30Q8TCC3 161 aaKnown RBP9.66□□□□□ -0.86
SHMT2-223ENST00000556689 YIPF6Q96EC8 236 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms