RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 BEST4Q8NFU0 473 aa13.58□□□□□ -0.24
PSEN1-217ENST00000556533 AP3S1Q92572 193 aa13.58□□□□□ -0.24
PSEN1-217ENST00000556533 RITA1Q96K30 269 aa13.58□□□□□ -0.24
PSEN1-217ENST00000556533 RASL11BQ9BPW5 248 aa13.58□□□□□ -0.24
PSEN1-217ENST00000556533 OR2D2Q9H210 308 aa13.58□□□□□ -0.24
PSEN1-217ENST00000556533 ANXA10Q9UJ72 324 aa13.58□□□□□ -0.24
PSEN1-217ENST00000556533 FGF16O43320 207 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 DIRAS3O95661 229 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 APOA1P02647 267 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 ELK1P19419 428 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 TMBIM6P55061 237 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 LINC00205P59089 165 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 ACTBP60709 375 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 HOGA1Q86XE5 327 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 H1FOOQ8IZA3 346 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-217ENST00000556533 RAB2BQ8WUD1 216 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 TOLLIPQ9H0E2 274 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 IFT46Q9NQC8 304 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 PLSCR3Q9NRY6 295 aa13.57□□□□□ -0.24
PSEN1-217ENST00000556533 PROP1O75360 226 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 CD28P10747 220 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 SOX6P35712 828 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 CBX5P45973 191 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 MMDQ15546 238 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 Q8N9W7 124 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
PSEN1-217ENST00000556533 CNTFRP26992 372 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 MC5RP33032 325 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 PRSS3P35030 304 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 SLC35E3Q7Z769 313 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 SNX29P2Q8IUI4 249 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 ZNF383Q8NA42 475 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 OR5AU1Q8NGC0 362 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 OR8H1Q8NGG4 311 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 WNT10AQ9GZT5 417 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 SDHAF2Q9NX18 166 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 LINC00527Q9UJ94 153 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 WASHC3Q9Y3C0 194 aa13.55□□□□□ -0.24
PSEN1-217ENST00000556533 CCDC160A6NGH7 325 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 OR5H14A6NHG9 310 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 LINC01548A6NM66 108 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 H0YJW9 148 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 M0QZ24 198 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 FBXO24O75426 580 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 LUMP51884 338 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-217ENST00000556533 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-217ENST00000556533 LIN7CQ9NUP9 197 aaKnown RBP13.54□□□□□ -0.24
PSEN1-217ENST00000556533 OR2W1Q9Y3N9 320 aa13.54□□□□□ -0.24
PSEN1-217ENST00000556533 RGS5O15539 181 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 HLA-DQB1P01920 261 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 APOA2P02652 100 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 FCGR2CP31995 323 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 OR5AN1Q8NGI8 311 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 SNAPC3Q92966 411 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 NOL4LQ96MY1 436 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-217ENST00000556533 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 KIAA1456Q9P272 454 aa13.53□□□□□ -0.24
PSEN1-217ENST00000556533 NBR2O15453 112 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 OR5H8P0DN80 308 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 RPS16P62249 146 aaKnown RBP13.52□□□□□ -0.25
PSEN1-217ENST00000556533 PLGLAQ15195 96 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 NSUN5P1Q3KNT7 163 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 RNASE12Q5GAN4 147 aaKnown RBP13.52□□□□□ -0.25
PSEN1-217ENST00000556533 C10orf99Q6UWK7 81 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 ZNF329Q86UD4 541 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 FOXRED2Q8IWF2 684 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 FAM71E2Q8N5Q1 922 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 ISOC1Q96CN7 298 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 C5orf30Q96GV9 206 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 BCL7BQ9BQE9 202 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 SLC35D1Q9NTN3 355 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 GAB2Q9UQC2 676 aa13.52□□□□□ -0.25
PSEN1-217ENST00000556533 IGKV1D-13A0A0B4J2D9 117 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 H3BMQ9 156 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 CTDSP2O14595 271 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 TUSC2O75896 110 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 IGHG2P01859 326 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 PMP2P02689 132 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 IGKV1-13P0DP09 117 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 AADACP22760 399 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 CDK10Q15131 360 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 OR5AP2Q8NGF4 316 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 CITED2Q99967 270 aaPredicted RBP13.51□□□□□ -0.25
PSEN1-217ENST00000556533 HSPB9Q9BQS6 159 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 FBXL15Q9H469 300 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 ZNF107Q9UII5 783 aaPredicted RBP13.51□□□□□ -0.25
PSEN1-217ENST00000556533 CEPT1Q9Y6K0 416 aa13.51□□□□□ -0.25
PSEN1-217ENST00000556533 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 TCRBV4S1A1TA0A5B7 111 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 PSMB11A5LHX3 300 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 RBBP9O75884 186 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 IGKV1-16P04430 117 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 CSF1P09603 554 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 THBS3P49746 956 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 PRR31Q5SQ13 230 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 LIN54Q6MZP7 749 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 ZNF645Q8N7E2 425 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms