RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 IGFL3Q6UXB1 125 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 ZNF66Q6ZN08 573 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 SLC35E3Q7Z769 313 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 FGFRL1Q8N441 504 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 ZADH2Q8N4Q0 377 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 ZNF610Q8N9Z0 462 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 OR13A1Q8NGR1 328 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 SCGB1C1Q8TD33 95 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 SFT2D1Q8WV19 159 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 LRRC29Q8WV35 223 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 TCTEX1D2Q8WW35 142 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 STARD4Q96DR4 205 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 RCC1LQ96I51 464 aaKnown RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 OR4C12Q96R67 309 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 RARRES2Q99969 163 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 RSG1Q9BU20 258 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 C20orf24Q9BUV8 137 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 WDR61Q9GZS3 305 aaKnown RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 OPN3Q9H1Y3 402 aaPredicted RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 RBKSQ9H477 322 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 ESRP2Q9H6T0 727 aaKnown RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 ZNF71Q9NQZ8 489 aaPredicted RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 UFSP2Q9NUQ7 469 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 CISD1Q9NZ45 108 aaKnown RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 LAMP3Q9UQV4 416 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 SLC25A15Q9Y619 301 aa4.51□□□□□ -1.69
GPHN-213ENST00000556501 INTS1Q8N201 2190 aaKnown RBP4.51□□□□□ -1.69
GPHN-213ENST00000556501 MYO15AQ9UKN7 3530 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 hCG_1809904A0A1W2PP81 198 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 A0A1W2PR64 198 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 A0A1W2PRV1 198 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ODAMA1E959 279 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 LRRC30A6NM36 301 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 C17orf98A8MV24 154 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 H3BQ15 152 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 SPINT2O43291 252 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 RAMP3O60896 148 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CLDN1O95832 211 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 IFNA1P01562 189 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 TFF1P04155 84 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ADH4P08319 380 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 DAOP14920 347 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 EGR1P18146 543 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 SSTR5P35346 364 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CFHR2P36980 270 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 GABRA2P47869 451 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 GLIPR1P48060 266 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 FABP6P51161 128 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 BRWD1-AS2P59051 145 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ZNF726P1Q15940 193 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ATP6V1FQ16864 119 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 MSMPQ1L6U9 139 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 Q3ZCU0 254 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 AARDQ4LEZ3 155 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 KIAA2026Q5HYC2 2103 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 SPANXN5Q5MJ07 72 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 BEND4Q6ZU67 534 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 SEM1Q6ZVN7 128 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CENPVQ7Z7K6 275 aaPredicted RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 ZNF429Q86V71 674 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 C1QL4Q86Z23 238 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ZFP82Q8N141 532 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ZNF808Q8N4W9 903 aaPredicted RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 ZNF561Q8N587 486 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CD177Q8N6Q3 437 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CYB561D1Q8N8Q1 229 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 MRGPRDQ8TDS7 321 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 C2CD4CQ8TF44 421 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 TAF15Q92804 592 aaKnown RBP eCLIP4.5□□□□□ -1.69
GPHN-213ENST00000556501 ISOC2Q96AB3 205 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 PINX1Q96BK5 328 aaKnown RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 RAB39BQ96DA2 213 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 MUCL1Q96DR8 90 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 TVP23CQ96ET8 276 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 ABHD17AQ96GS6 310 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CIB3Q96Q77 187 aaPredicted RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 HSD17B10Q99714 261 aaKnown RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 TMEM147Q9BVK8 224 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 MRPL37Q9BZE1 423 aaKnown RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 NCOR1P1Q9H4R4 102 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 VSIRQ9H7M9 311 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 MSL2Q9HCI7 577 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 SIRT7Q9NRC8 400 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 RPRMQ9NS64 109 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.5□□□□□ -1.69
GPHN-213ENST00000556501 FZR1Q9UM11 496 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 WASF3Q9UPY6 502 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 PUS1Q9Y606 427 aaKnown RBP eCLIP4.5□□□□□ -1.69
GPHN-213ENST00000556501 SPTBN4Q9H254 2564 aa4.5□□□□□ -1.69
GPHN-213ENST00000556501 USF3Q68DE3 2245 aa4.49□□□□□ -1.69
GPHN-213ENST00000556501 IGKV1D-17A0A075B6S4 117 aa4.49□□□□□ -1.69
GPHN-213ENST00000556501 IGHV3-43A0A0B4J1X8 118 aa4.49□□□□□ -1.69
GPHN-213ENST00000556501 UBE2L5PA0A1B0GUS4 154 aa4.49□□□□□ -1.69
GPHN-213ENST00000556501 MAP1LC3B2A6NCE7 125 aa4.49□□□□□ -1.69
GPHN-213ENST00000556501 CXorf65A6NEN9 183 aa4.49□□□□□ -1.69
GPHN-213ENST00000556501 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms