RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TBC1D28Q2M2D7 210 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 RSPO1Q2MKA7 263 aaPredicted RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 RNASE10Q5GAN6 216 aaKnown RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 ATAD3CQ5T2N8 411 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 TMEM42Q69YG0 159 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 FAHD2BQ6P2I3 314 aaPredicted RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 BTNL3Q6UXE8 466 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 NCCRP1Q6ZVX7 275 aaPredicted RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 SAXO1Q8IYX7 474 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 FAM89BQ8N5H3 189 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 ARRDC1Q8N5I2 433 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 SPICQ8N5J4 248 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 ZSCAN4Q8NAM6 433 aaPredicted RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 ACBD4Q8NC06 268 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 PXT1Q8NFP0 134 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 OR51T1Q8NGJ9 327 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 OR4C16Q8NGL9 310 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 OR1K1Q8NGR3 316 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 OR6K3Q8NGY3 331 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 TNFAIP8L1Q8WVP5 186 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 RAB3CQ96E17 227 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 FAHD2AQ96GK7 314 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 HYLS1Q96M11 299 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 GINS4Q9BRT9 223 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 TM2D1Q9BX74 207 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 SELENOIQ9C0D9 397 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 LPAR5Q9H1C0 372 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 RHOFQ9HBH0 211 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 MYOZ1Q9NP98 299 aaPredicted RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 ZNF224Q9NZL3 707 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 CLCF1Q9UBD9 225 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 EIF3KQ9UBQ5 218 aaKnown RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 ZNF407Q9C0G0 2248 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 ARHGAP21Q5T5U3 1957 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 IGKV1-9A0A0C4DH69 117 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 TMEM235A6NFC5 223 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 M0QXV9 152 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 WDR1O75083 606 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ADAP1O75689 374 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 CD3DP04234 171 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 GATA1P15976 413 aaPredicted RBP4.2□□□□□ -1.74
SRP54-211ENST00000556445 MGMTP16455 207 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 BLVRBP30043 206 aaPredicted RBP4.2□□□□□ -1.74
SRP54-211ENST00000556445 PMELP40967 661 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 OR3A4PP47883 348 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 PDLIM4P50479 330 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 CCR6P51684 374 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 CEBPGP53567 150 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 TAS2R31P59538 309 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 TAS2R46P59540 309 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 UBE2MP61081 183 aaKnown RBP4.2□□□□□ -1.74
SRP54-211ENST00000556445 RAB14P61106 215 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 FAM3AP98173 230 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 UNC119Q13432 240 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ARFRP1Q13795 201 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 RSU1Q15404 277 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 UBE2V2Q15819 145 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 C5orf64Q2M2E5 130 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 LINC00303Q3SY05 128 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 SOHLH1Q5JUK2 328 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 PRSS57Q6UWY2 283 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 C3P1Q6ZMU1 363 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 Q6ZS92 163 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 Q6ZT83 130 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 SSX8Q7RTT4 187 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 TRAPPC6BQ86SZ2 158 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 MKXQ8IYA7 352 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 LINC01561Q8N1V8 128 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 BPIFB2Q8N4F0 458 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 MAPKAPK5-AS1Q8N8E1 139 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ZDHHC22Q8N966 263 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 NEXN-AS1Q8NBZ9 246 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 OR4F17Q8NGA8 305 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 OR5A2Q8NGI9 324 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 OR4F5Q8NH21 305 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 MRAPQ8TCY5 172 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ZNF486Q96H40 463 aaPredicted RBP4.2□□□□□ -1.74
SRP54-211ENST00000556445 POM121L2Q96KW2 1035 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 OR4F4Q96R69 305 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ATP5SQ99766 215 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 CHST6Q9GZX3 395 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 TOLLIPQ9H0E2 274 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ELL3Q9HB65 397 aaPredicted RBP4.2□□□□□ -1.74
SRP54-211ENST00000556445 NRN1Q9NPD7 142 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 SPRR3Q9UBC9 169 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ZNF222Q9UK12 451 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 ANAPC10Q9UM13 185 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 MPC1Q9Y5U8 109 aa4.2□□□□□ -1.74
SRP54-211ENST00000556445 EP300Q09472 2414 aaPredicted RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 MEIKINA0A087WXM9 373 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 C5orf49A4QMS7 147 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR5B21A6NL26 309 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 MFNGO00587 321 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 IGHV3-9P01782 118 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 GIPP09681 153 aaPredicted RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 SULT1A3P0DMM9 295 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SULT1A4P0DMN0 295 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 IGHV4-31P0DP07 118 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms