RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 VEGFCP49767 419 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 CRIP2P52943 208 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-220ENST00000556433 AQP4P55087 323 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 TMEM50BP56557 158 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 TMEM267Q0VDI3 215 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-220ENST00000556433 TRAM1Q15629 374 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 C19orf54Q5BKX5 351 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 CASTOR1Q8WTX7 329 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 ARHGAP5-AS1Q96IT6 56 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 CLCC1Q96S66 551 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 RNF5Q99942 180 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 ALX4Q9H161 411 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-220ENST00000556433 ISYNA1Q9NPH2 558 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 NUBP2Q9Y5Y2 271 aa17.52■□□□□ 0.4
ACTN1-220ENST00000556433 FOXI3A8MTJ6 420 aaPredicted RBP17.51■□□□□ 0.39
ACTN1-220ENST00000556433 RGS10O43665 173 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 LY86O95711 162 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 EGR2P11161 476 aaPredicted RBP17.51■□□□□ 0.39
ACTN1-220ENST00000556433 TCTEX1D1Q8N7M0 179 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 DRAXINQ8NBI3 349 aaPredicted RBP17.51■□□□□ 0.39
ACTN1-220ENST00000556433 ASCL2Q99929 193 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 CCDC90BQ9GZT6 254 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 C12orf4Q9NQ89 552 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 U3KQK5 164 aa17.51■□□□□ 0.39
ACTN1-220ENST00000556433 NBEAL2Q6ZNJ1 2754 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 OVOL1O14753 267 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 PSMA1P25786 263 aaKnown RBP17.5■□□□□ 0.39
ACTN1-220ENST00000556433 CLDN12P56749 244 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 PSG5Q15238 335 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 C2orf76Q3KRA6 126 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 ZNF429Q86V71 674 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 PPP1R27Q86WC6 154 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 NRG4Q8WWG1 115 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 PTX4Q96A99 478 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 CMSS1Q9BQ75 279 aaKnown RBP17.5■□□□□ 0.39
ACTN1-220ENST00000556433 PECRQ9BY49 303 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 TOLLIPQ9H0E2 274 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 METTL1Q9UBP6 276 aaKnown RBP17.5■□□□□ 0.39
ACTN1-220ENST00000556433 ZNF221Q9UK13 617 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 GAB2Q9UQC2 676 aa17.5■□□□□ 0.39
ACTN1-220ENST00000556433 PROP1O75360 226 aa17.49■□□□□ 0.39
ACTN1-220ENST00000556433 CPEP16870 476 aa17.49■□□□□ 0.39
ACTN1-220ENST00000556433 CALRP27797 417 aaKnown RBP17.49■□□□□ 0.39
ACTN1-220ENST00000556433 MLLT11Q13015 90 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-220ENST00000556433 CD200R1LQ6Q8B3 271 aa17.49■□□□□ 0.39
ACTN1-220ENST00000556433 UNQ5815/PRO19632Q6UWF5 114 aa17.49■□□□□ 0.39
ACTN1-220ENST00000556433 DLX4Q92988 240 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-220ENST00000556433 FAM3DQ96BQ1 224 aa17.49■□□□□ 0.39
ACTN1-220ENST00000556433 FAM103A1Q9BTL3 118 aaKnown RBP17.49■□□□□ 0.39
ACTN1-220ENST00000556433 TENM3Q9P273 2699 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 KMT2CQ8NEZ4 4911 aaKnown RBP17.48■□□□□ 0.39
ACTN1-220ENST00000556433 TRDCB7Z8K6 153 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 LINC01619G3V211 115 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 SLURP1P55000 103 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 LINC00205P59089 165 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 RPS16P62249 146 aaKnown RBP17.48■□□□□ 0.39
ACTN1-220ENST00000556433 FABP5Q01469 135 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 ACTBL2Q562R1 376 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 PLAC9Q5JTB6 97 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 ZNF562Q6V9R5 426 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 OR56B1Q8NGI3 324 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 V9GY05 133 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 SORL1Q92673 2214 aa17.48■□□□□ 0.39
ACTN1-220ENST00000556433 IGKV1-6A0A0C4DH72 117 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 DENRO43583 198 aaKnown RBP17.47■□□□□ 0.39
ACTN1-220ENST00000556433 SAP30O75446 220 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 LGALS1P09382 135 aaKnown RBP17.47■□□□□ 0.39
ACTN1-220ENST00000556433 SNRPBP14678 240 aaKnown RBP17.47■□□□□ 0.39
ACTN1-220ENST00000556433 RANBP1P43487 201 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 MAP2K4P45985 399 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 AKIRIN2Q53H80 203 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 PYHIN1Q6K0P9 492 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 ZNF383Q8NA42 475 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 LFNGQ8NES3 379 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 MS4A10Q96PG2 267 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 TSNAXQ99598 290 aaKnown RBP17.47■□□□□ 0.39
ACTN1-220ENST00000556433 MGLLQ99685 303 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 TPSG1Q9NRR2 321 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 RDH8Q9NYR8 311 aa17.47■□□□□ 0.39
ACTN1-220ENST00000556433 IGHV4OR15-8A0A075B7B6 117 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 A0A087WW49 117 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 CA2P00918 260 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 IGHV3-11P01762 117 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 IGKV1-16P04430 117 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 TFAP2AP05549 437 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 CD40LGP29965 261 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 PSMD7P51665 324 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 PRSS48Q7RTY5 328 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 ACOT13Q9NPJ3 140 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 RAB22AQ9UL26 194 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 SMAD5-AS1Q9Y6J3 95 aa17.46■□□□□ 0.39
ACTN1-220ENST00000556433 M0R1X1 148 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 LDLRAD4O15165 306 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 APOA2P02652 100 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 CRHBPP24387 322 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 PLA2G7Q13093 441 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 HES5Q5TA89 166 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 PDPNQ86YL7 162 aa17.45■□□□□ 0.38
ACTN1-220ENST00000556433 FLYWCH2Q96CP2 140 aaKnown RBP17.45■□□□□ 0.38
ACTN1-220ENST00000556433 TMEM272A0A1B0GTI8 110 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms