RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 APOL4Q9BPW4 351 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 FAM110AQ9BQ89 295 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 CHST5Q9GZS9 411 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 COMMD4Q9H0A8 199 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 ALX4Q9H161 411 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 MAGIXQ9H6Y5 334 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 RETNQ9HD89 108 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ATXN3-239ENST00000556315 PRR32B1ATL7 298 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF736B4DX44 427 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 TXNL1O43396 289 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 KDM4BO94953 1096 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 BRI3O95415 125 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 SCGB1D1O95968 90 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 HLA-DRB1P01911 266 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ATF1P18846 271 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 GZMHP20718 246 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ZP3P21754 424 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 SLC2A5P22732 501 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ARL3P36405 182 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 GLP1RP43220 463 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ALDH3A2P51648 485 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 PSMD7P51665 324 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 CXCR4P61073 352 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ADARB1P78563 741 aaKnown RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 TMEM267Q0VDI3 215 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 PPP1R8Q12972 351 aaKnown RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 GINS1Q14691 196 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ATXN7L3Q14CW9 347 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 TATDN3Q17R31 274 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 FAM98BQ52LJ0 330 aaKnown RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 LGALS9CQ6DKI2 356 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 FAHD1Q6P587 224 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF773Q6PK81 442 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 HAPLN4Q86UW8 402 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 RDH10Q8IZV5 341 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 CBR4Q8N4T8 237 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 BBS1Q8NFJ9 593 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 OR52M1Q8NGK5 317 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 TRUB1Q8WWH5 349 aaKnown RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 RTN4IP1Q8WWV3 396 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 S100ZQ8WXG8 99 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 PP6455Q8WZ26 134 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 TMEM106AQ96A25 262 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 MBOAT4Q96T53 435 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 SLC29A1Q99808 456 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 CIB1Q99828 191 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 TEX12Q9BXU0 123 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 PPIL3Q9H2H8 161 aaKnown RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 SLC25A19Q9HC21 320 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 RANGRFQ9HD47 186 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-239ENST00000556315 KIF25Q9UIL4 384 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
ATXN3-239ENST00000556315 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 IGHV4-28A0A0C4DH34 117 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 IGKV1-9A0A0C4DH69 117 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 IGKV1-12A0A0C4DH73 117 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 ARPC2O15144 300 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 ATP6V0E1O15342 81 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 MAGEB3O15480 346 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 MAGEB4O15481 346 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 DEDDO75618 318 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 TPPPO94811 219 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 IGKV1D-12P01611 117 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 MRPL3P09001 348 aaKnown RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 OCM2P0CE71 109 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 OCMP0CE72 109 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 SLC2A2P11168 524 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 ATP6V1B2P21281 511 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 CD40LGP29965 261 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 BLVRBP30043 206 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 MAGEA2P43356 314 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 RANBP1P43487 201 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 KCNJ3P48549 501 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 AMTP48728 403 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 PAX5Q02548 391 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 TMED1Q13445 227 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 KLF5Q13887 457 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 GK3PQ14409 553 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 CDK5R1Q15078 307 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 MMDQ15546 238 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 ODF4Q2M2E3 257 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 Q3ZCU0 254 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 ZNF660Q6AZW8 331 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 OR2T5Q6IEZ7 315 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 LCN12Q6JVE5 192 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 PYHIN1Q6K0P9 492 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 IL34Q6ZMJ4 242 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 C9orf47Q6ZRZ4 202 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 UTS2BQ765I0 119 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 CLVS1Q8IUQ0 354 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-239ENST00000556315 SAXO1Q8IYX7 474 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 Q8N402 240 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 TCTEX1D1Q8N7M0 179 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 OR10G2Q8NGC3 310 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 OR13F1Q8NGS4 319 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 OR2T29Q8NH02 315 aa3.64□□□□□ -1.83
ATXN3-239ENST00000556315 MRGPRDQ8TDS7 321 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms