RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 OR10A7Q8NGE5 316 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 OR51D1Q8NGF3 324 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 DPF1Q92782 380 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 SLC35D1Q9NTN3 355 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 IL36GQ9NZH8 169 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 COMMD3Q9UBI1 195 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 TRAPPC2LQ9UL33 140 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 MRPS28Q9Y2Q9 187 aaKnown RBP5.29□□□□□ -1.56
PSEN1-216ENST00000556066 V9GYH0 126 aa5.29□□□□□ -1.56
PSEN1-216ENST00000556066 TRBV5-5A0A0J9YX44 114 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 WI2-2373I1.2A0A1W2PRP0 233 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 C15orf65H3BRN8 121 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 K7EIL1 84 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 SPINT2O43291 252 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 FGF16O43320 207 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 SLC25A17O43808 307 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 HPGDSO60760 199 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF780AO75290 641 aaPredicted RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 ACTL6BO94805 426 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 DUS4LO95620 317 aaKnown RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 MT-ND4P03905 459 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 MAS1P04201 325 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 S100A6P06703 90 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 IGFBP3P17936 291 aaPredicted RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 IL3RAP26951 378 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 RANBP1P43487 201 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 KRTAP10-11P60412 298 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 RPL23AP62750 156 aaKnown RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 PAX5Q02548 391 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF816Q0VGE8 651 aaPredicted RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 KIR3DS1Q14943 382 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF79Q15937 498 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 MPV17LQ2QL34 196 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 YIF1BQ5BJH7 314 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 NHLRC3Q5JS37 347 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 SPANXN2Q5MJ10 180 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 FAM27D1Q5T7N8 215 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 DMKNQ6E0U4 476 aaPredicted RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 AWAT2Q6E213 333 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 TRAT1Q6PIZ9 186 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 GLIPR1L1Q6UWM5 242 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF497Q6ZNH5 498 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 LCNL1Q6ZST4 164 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 OR2W3Q7Z3T1 314 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 CEACAM19Q7Z692 300 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 ZNF554Q86TJ5 538 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 LINC00596Q86U02 117 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 LINC00482Q8N8I6 264 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 POC5Q8NA72 575 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 MINDY2Q8NBR6 621 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 OR10V1Q8NGI7 309 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 OR52M1Q8NGK5 317 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 OR2T10Q8NGZ9 312 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 OR4K15Q8NH41 348 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 SETD6Q8TBK2 473 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 RBMXL1Q96E39 390 aaKnown RBP5.28□□□□□ -1.56
PSEN1-216ENST00000556066 DIRAS2Q96HU8 199 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 PGLYRP3Q96LB9 341 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 DUX3Q96PT4 197 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 OR14A2Q96R54 314 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 SELENOIQ9C0D9 397 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 CDIP1Q9H305 208 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 BANF2Q9H503 90 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 GNG12Q9UBI6 72 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 FBXL7Q9UJT9 491 aa5.28□□□□□ -1.56
PSEN1-216ENST00000556066 UBE2QL1A1L167 161 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 FABP12A6NFH5 140 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 ZNF736B4DX44 427 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-216ENST00000556066 C12orf77C9JDV5 145 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 AP4M1O00189 453 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 SLC31A2O15432 143 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 ORC5O43913 435 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 CRTAPO75718 401 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-216ENST00000556066 MOSP00540 346 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 IGHG2P01859 326 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 HBZP02008 142 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 S100A9P06702 114 aaKnown RBP5.27□□□□□ -1.57
PSEN1-216ENST00000556066 MGMTP16455 207 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 RCC1P18754 421 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-216ENST00000556066 GALP22466 123 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 GPR12P47775 334 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 THBS3P49746 956 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 OR10A3P58181 314 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 TAS2R43P59537 309 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 RPS11P62280 158 aaKnown RBP eCLIP5.27□□□□□ -1.57
PSEN1-216ENST00000556066 TRAM1Q15629 374 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 ACSM3Q53FZ2 586 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 C6orf183Q5T699 404 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 IDNKQ5T6J7 187 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 SLC25A24Q6NUK1 477 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 TEX38Q6PEX7 206 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 CNIH2Q6PI25 160 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 FAM131AQ6UXB0 335 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 ETV3LQ6ZN32 361 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 NR2C2APQ86WQ0 139 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 TGIF2LXQ8IUE1 241 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 ZNF695Q8IW36 515 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 IZUMO1Q8IYV9 350 aa5.27□□□□□ -1.57
PSEN1-216ENST00000556066 CADM3Q8N126 398 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms