RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 COL10A1Q03692 680 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 SNTB1Q13884 538 aaKnown RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 OPCMLQ14982 345 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 ANKRD55Q3KP44 614 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 PHLDA2Q53GA4 152 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 Q5BKY6 102 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 KRBOX4Q5JUW0 171 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 C11orf87Q6NUJ2 197 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 Q6ZPA2 131 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF546Q86UE3 836 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 H1FOOQ8IZA3 346 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 LGI3Q8N145 548 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 OR8H1Q8NGG4 311 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 CA5BP1Q8WTZ4 195 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 SECTM1Q8WVN6 248 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 ITLN1Q8WWA0 313 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 IL1F10Q8WWZ1 152 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 GALMQ96C23 342 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 GALNT14Q96FL9 552 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 AKR1E2Q96JD6 320 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 C2orf50Q96LR7 162 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 Q96MF0 132 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 CABLES2Q9BTV7 478 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 MFFQ9GZY8 342 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 KCNJ16Q9NPI9 418 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 SLC2A9Q9NRM0 540 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 KIF25Q9UIL4 384 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 UBE2J1Q9Y385 318 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 OR2W1Q9Y3N9 320 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 DYNC2H1Q8NCM8 4307 aaKnown RBP5.67□□□□□ -1.5
SLIRP-204ENST00000555890 CADP27708 2225 aa5.67□□□□□ -1.5
SLIRP-204ENST00000555890 KIAA2026Q5HYC2 2103 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 IGKV1-6A0A0C4DH72 117 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 C3orf85A0A1B0GTC6 90 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 PGPEP1LA6NFU8 196 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 C17orf100A8MU93 164 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 HSD17B6O14756 317 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 MGST3O14880 152 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 ADAP1O75689 374 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 B3GALNT1O75752 331 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 OR2F2O95006 317 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 LHBP01229 141 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 IFNA7P01567 189 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 RLN2P04090 185 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 CD55P08174 381 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 HOXB5P09067 269 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 OR5AC1P0C628 307 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 RPA2P15927 270 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 GZMHP20718 246 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 GNRHRP30968 328 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 IL2RGP31785 369 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 S100A11P31949 105 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 GABRA2P47869 451 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 PAX5Q02548 391 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 AESQ08117 197 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 OR2F1Q13607 317 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM187Q14656 261 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 SMCO1Q147U7 214 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 HERPUD1Q15011 391 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 HMGN3Q15651 99 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 ADIPOQQ15848 244 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 BEX5Q5H9J7 111 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 Q5PR19 223 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 TMUB2Q71RG4 321 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 GCSAMQ8N6F7 178 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 CD177Q8N6Q3 437 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 LRTM2Q8N967 370 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 INO80EQ8NBZ0 244 aaPredicted RBP5.66□□□□□ -1.5
SLIRP-204ENST00000555890 OR10V1Q8NGI7 309 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 OR5D13Q8NGL4 314 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 Q8TCH9 128 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 PPP1R1CQ8WVI7 109 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 GPHA2Q96T91 129 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 DNTTIP1Q9H147 329 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 SLC25A32Q9H2D1 315 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 TAF9BQ9HBM6 251 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 RAB9BQ9NP90 201 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 DYNLRB1Q9NP97 96 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 CCL28Q9NRJ3 127 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 ZFP57Q9NU63 452 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 RDH8Q9NYR8 311 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 GSKIPQ9P0R6 139 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 PPP1R3CQ9UQK1 317 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 RBM7Q9Y580 266 aaKnown RBP5.66□□□□□ -1.5
SLIRP-204ENST00000555890 DNAH1Q9P2D7 4330 aa5.66□□□□□ -1.5
SLIRP-204ENST00000555890 ROS1P08922 2347 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 TRAV14DV4A0A0A6YYC5 116 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 DUXBA0A1W2PPF3 345 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-204ENST00000555890 SPINT2O43291 252 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 RP2O75695 350 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 MPC2O95563 127 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 MUC1P15941 1255 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-204ENST00000555890 CXCL2P19875 107 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 APOBEC3AP31941 199 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-204ENST00000555890 CEACAM6P40199 344 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 OR3A1P47881 315 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 RAB14P61106 215 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 KRTAP1-1Q07627 177 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 IAH1Q2TAA2 248 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms