RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 IL3RAP26951 378 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 CLDN18P56856 261 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 SELENOTP62341 195 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 GNB2P62879 340 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 SLC38A11Q08AI6 406 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 ARL16Q0P5N6 197 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF324BQ6AW86 544 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 MRPL21Q7Z2W9 205 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 MKXQ8IYA7 352 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 ZDHHC23Q8IYP9 409 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 ELOVL1Q9BW60 279 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 CACNG5Q9UF02 275 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 RTTNQ86VV8 2226 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 C9orf172C9J069 976 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 PSG2P11465 335 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 COX5AP20674 150 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 TPPP2P59282 170 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM183BQ1AE95 376 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 CEACAM21Q3KPI0 293 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 CALHM1Q8IU99 346 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR4F5Q8NH21 305 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR10J5Q8NHC4 309 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR4F4Q96R69 305 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM147Q9BVK8 224 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 PRRG4Q9BZD6 226 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM106BQ9NUM4 274 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 IGKV1-6A0A0C4DH72 117 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 F6UZH7 168 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 YPEL1O60688 119 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 NXPH3O95157 252 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 MPLP40238 635 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 PLP2Q04941 152 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR1C1Q15619 314 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 MOB1BQ7L9L4 216 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR56B2PQ8NGI1 322 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR10V1Q8NGI7 309 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 OR5A2Q8NGI9 324 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 APH1AQ96BI3 265 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 YPEL2Q96QA6 119 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 TBX15Q96SF7 602 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM9BQ9NQ34 198 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 NCOR1O75376 2440 aa9.04□□□□□ -0.96
MTHFD1-210ENST00000555252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 HS3ST1O14792 307 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 SS18L1O75177 396 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 BCL3P20749 454 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 RPL29P47914 159 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 PRSS12P56730 875 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 SOX8P57073 446 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 SRYQ05066 204 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 ANKRD39Q53RE8 183 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 CDCP2Q5VXM1 449 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF705AQ6ZN79 300 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 Q6ZRM9 215 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 TUSC5Q8IXB3 177 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 CMTM2Q8TAZ6 248 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 RAB1CQ92928 201 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 DIRC2Q96SL1 478 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 TTTY12Q9BZ98 90 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 WDFY4Q6ZS81 3184 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 VPS13AQ96RL7 3174 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 UBE2L5PA0A1B0GUS4 154 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 C5orf49A4QMS7 147 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 RNF212BA8MTL3 300 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF705FA8MVS1 300 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 TRAPPC2LH3BP13 241 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 IGHV3-9P01782 118 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF705DP0CH99 300 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF705BP0CI00 300 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 IAPPP10997 89 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 BRS3P32247 399 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 MRPS11P82912 194 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 PLGLB1Q02325 96 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 RTP5Q14D33 572 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 PDCD1Q15116 288 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 LINC01551Q86U37 167 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 MCEMP1Q8IX19 187 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 OR10G9Q8NGN4 311 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 OR10G7Q8NGN6 311 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 OR5P3Q8WZ94 311 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 LOXL4Q96JB6 756 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 ARRDC1-AS1Q9H2J1 176 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 OR51B6Q9H340 312 aa9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 KLF13Q9Y2Y9 288 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-210ENST00000555252 NCKAP5O14513 1909 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 A0A0U1RQK1 487 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 ZNF320A2RRD8 509 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 C17orf112F2Z3M2 114 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 SLC33A1O00400 549 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 LILRA1O75019 489 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 MMP23AO75900 390 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 IGKV1-39P01597 117 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 IGKV1-5P01602 117 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 IGKV1D-39P04432 117 aa9.02□□□□□ -0.97
MTHFD1-210ENST00000555252 VWC2Q2TAL6 325 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms