RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PDLIM4P50479 330 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 CD69Q07108 199 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 FIZ1Q96SL8 496 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 MBD1Q9UIS9 605 aaPredicted RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 TNFRSF18Q9Y5U5 241 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 KIF13BQ9NQT8 1826 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 CDKN2AP42771 156 aaKnown RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 ABCA3Q99758 1704 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 SLC25A20O43772 301 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 CTSVO60911 334 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 S1PR2O95136 353 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 CCL4P13236 92 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 VAX2Q9UIW0 290 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 LOC105371242A0A075B767 164 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 IGSF11Q5DX21 431 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 SSC4DQ8WTU2 575 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 LEAP2Q969E1 77 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 KCNK17Q96T54 332 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 TET1Q8NFU7 2136 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 CCL3P10147 92 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 PGFP49763 221 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 KIR2DL4Q99706 377 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 FRRS1LQ9P0K9 344 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 SERGEFQ9UGK8 458 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 ARF6P62330 175 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 NFAM1Q8NET5 270 aaPredicted RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 WNT10AQ9GZT5 417 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 PARLQ9H300 379 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 S4R3C0 116 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 ZFPL1O95159 310 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 IGHV3-48P01763 117 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 RAE1P78406 368 aaKnown RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 ACVR1Q04771 509 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 TMEM170BQ5T4T1 132 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 Q6ZNX1 250 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 SPOCK3Q9BQ16 436 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 NKX2-8O15522 239 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 CYB5R3P00387 301 aaPredicted RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 CRPP02741 224 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 TPRX1Q8N7U7 411 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 TMEM160Q9NX00 188 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 TRGV3P03979 118 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PRDX2P32119 198 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 ZNF770Q6IQ21 691 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 ARRDC5A6NEK1 342 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 CNTFRP26992 372 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 OR2Y1Q8NGV0 311 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 RAB24Q969Q5 203 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 TMEM229AB2RXF0 380 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 SMIM18P0DKX4 95 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 FXYD3Q14802 87 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 SIRT7Q9NRC8 400 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 CISD1Q9NZ45 108 aaKnown RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 H3BRM9 83 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 IGHV4-39P01824 125 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 LINC00869P0C866 280 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 P2RY1P47900 373 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 UCNP55089 124 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 TEPPQ6URK8 271 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 LRP10Q7Z4F1 713 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 CBLN2Q8IUK8 224 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 ITLN1Q8WWA0 313 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 SLC52A3Q9NQ40 469 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 YBX2Q9Y2T7 364 aaKnown RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 AMY1AP04745 511 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 CTSDP07339 412 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 OR10J1P30954 320 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 LCN2P80188 198 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 NRN1LQ496H8 165 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 ABLIM2Q6H8Q1 611 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 STPG3Q8N7X2 389 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 ADAD2Q8NCV1 583 aaKnown RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 OR5AN1Q8NGI8 311 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 EEF1AKMT3Q96AZ1 226 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 RPP25Q9BUL9 199 aaKnown RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 A8MWL6 223 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PGA4P0DJD7 388 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PGA5P0DJD9 388 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PSG9Q00887 426 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 GAB4Q2WGN9 574 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 ZNF506Q5JVG8 444 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 FAM209BQ5JX69 171 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 MS4A5Q9H3V2 200 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PPIAL4EA0A075B759 164 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PPIAL4DF5H284 164 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PPIAL4FP0DN26 164 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 FAM89BQ8N5H3 189 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 MRPL24Q96A35 216 aaKnown RBP5.99□□□□□ -1.45
SYNE2-216ENST00000555002 CYB5R1Q9UHQ9 305 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 RNF115Q9Y4L5 304 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 PPIAL4AQ9Y536 164 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 SOCS1O15524 211 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 LTBRP36941 435 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 TRGV2A0A075B6R0 118 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 LEUTXA8MZ59 168 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 J3QT63 122 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 HBZP02008 142 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 SEC11BP0C7V7 166 aa5.99□□□□□ -1.45
SYNE2-216ENST00000555002 DCAF12L2Q5VW00 463 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms