RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 A0A1B0GU03 582 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 TMEM210A6NLX4 147 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 HSPA12AO43301 675 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 SNCAP37840 140 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 ERVK11-1P61568 191 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 Q6P435 159 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 CCL28Q9NRJ3 127 aa14.48□□□□□ -0.09
SHOX-204ENST00000554971 IGKV1D-13A0A0B4J2D9 117 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 FAM157AC9JC47 383 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 SIGLEC5O15389 551 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 SPRY3O43610 288 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 ADH4P08319 380 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 IGKV1-13P0DP09 117 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 CA6P23280 308 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 LMO1P25800 156 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 PAX6P26367 422 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 CAMLGP49069 296 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 CCL8P80075 99 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 KRTAP1-3Q8IUG1 177 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 PBDC1Q9BVG4 233 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 C19orf12Q9NSK7 152 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 BEX4Q9NWD9 120 aaPredicted RBP14.47□□□□□ -0.09
SHOX-204ENST00000554971 CSPG4Q6UVK1 2322 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.47□□□□□ -0.09
SHOX-204ENST00000554971 CD80P33681 288 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 CD200P41217 278 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 NHLH2Q02577 135 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 ZNF146Q15072 292 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 BATF2Q8N1L9 274 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 GNPNAT1Q96EK6 184 aaPredicted RBP14.47□□□□□ -0.09
SHOX-204ENST00000554971 TMEM231Q9H6L2 316 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 IL36RNQ9UBH0 155 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 FAM96BQ9Y3D0 163 aa14.47□□□□□ -0.09
SHOX-204ENST00000554971 BTBD17A6NE02 478 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 ADAM20O43506 726 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 ATP5J2P56134 94 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 TMEM252Q8N6L7 170 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 OR2Z1Q8NG97 314 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 RDH5Q92781 318 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 LSM10Q969L4 123 aaKnown RBP14.46□□□□□ -0.09
SHOX-204ENST00000554971 BSCL2Q96G97 398 aaPredicted RBP14.46□□□□□ -0.09
SHOX-204ENST00000554971 HIPK2Q9H2X6 1198 aa14.46□□□□□ -0.09
SHOX-204ENST00000554971 ABCA2Q9BZC7 2435 aa14.46□□□□□ -0.1
SHOX-204ENST00000554971 TEP1Q99973 2627 aaKnown RBP14.45□□□□□ -0.1
SHOX-204ENST00000554971 HSD17B6O14756 317 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 SH2D1BO14796 132 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 TSPAN9O75954 239 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 OR8U9P0C7N5 309 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 ZNF44P15621 663 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 FIP1L1Q6UN15 594 aaKnown RBP14.45□□□□□ -0.1
SHOX-204ENST00000554971 ZNF497Q6ZNH5 498 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 TGIF2LYQ8IUE0 185 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 OR10V1Q8NGI7 309 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 OR8U1Q8NH10 309 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 WIPI2Q9Y4P8 454 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 MTORP42345 2549 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 PRH1P02810 166 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 SERPINE2P07093 398 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 POLR2GP62487 172 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHOX-204ENST00000554971 GUK1Q16774 197 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 HFEQ30201 348 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 MIDNQ504T8 468 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 DPPA3Q6W0C5 159 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 RAB40CQ96S21 281 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 RAB1BQ9H0U4 201 aa14.45□□□□□ -0.1
SHOX-204ENST00000554971 F8P00451 2351 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 IGHV3-64DA0A0J9YX35 117 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 FAM24AA6NFZ4 105 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 WRBO00258 174 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 F12P00748 615 aaPredicted RBP14.44□□□□□ -0.1
SHOX-204ENST00000554971 CD55P08174 381 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 PGA5P0DJD9 388 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 NPBWR1P48145 328 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 EFNA4P52798 201 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 LRRC75A-AS1Q8N1F1 130 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 SCCPDHQ8NBX0 429 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 OR2V2Q96R30 315 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 ADAT1Q9BUB4 502 aaKnown RBP14.44□□□□□ -0.1
SHOX-204ENST00000554971 SMCO4Q9NRQ5 59 aa14.44□□□□□ -0.1
SHOX-204ENST00000554971 MBNL3Q9NUK0 354 aaKnown RBP14.44□□□□□ -0.1
SHOX-204ENST00000554971 IGSF23A1L1A6 192 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 LYNX1G3V0Z9 82 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 K7N7A8 449 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 HSPB6O14558 160 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 DFFBO76075 338 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 LYNX1P0DP58 116 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 ZNF616Q08AN1 781 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 ZNF525Q8N782 197 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 PLPPR1Q8TBJ4 325 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 ZNF488Q96MN9 340 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 SCRT1Q9BWW7 348 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 CXXC4Q9H2H0 198 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 PRELID3BQ9Y3B1 194 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.43□□□□□ -0.1
SHOX-204ENST00000554971 SLC33A1O00400 549 aaPredicted RBP14.43□□□□□ -0.1
SHOX-204ENST00000554971 RHBDL1O75783 438 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 CXorf66Q5JRM2 361 aaPredicted RBP14.43□□□□□ -0.1
SHOX-204ENST00000554971 WDR86Q86TI4 376 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 HSD17B11Q8NBQ5 300 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 ZBTB34Q8NCN2 500 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms