RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TEX29Q8N6K0 151 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZFP41Q8N8Y5 198 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR7G1Q8NGA0 311 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR4C13Q8NGP0 309 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LYPD6BQ8NI32 183 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CAPSLQ8WWF8 208 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 H1FXQ92522 213 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 EEF1AKMT3Q96AZ1 226 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 GALNT14Q96FL9 552 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RBBP8Q99708 897 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 MICU1Q9BPX6 476 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 EFCAB11Q9BUY7 163 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SHCBP1LQ9BZQ2 653 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TSGA10Q9BZW7 698 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR2J1Q9GZK6 312 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ELOVL6Q9H5J4 265 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF442Q9H7R0 627 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 GEMIN7Q9H840 131 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TMEM165Q9HC07 324 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 HMG20AQ9NP66 347 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LYARQ9NX58 379 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PTTG3PQ9NZH4 202 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 IFNKQ9P0W0 207 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZNRD1Q9P1U0 126 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CLN8Q9UBY8 286 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 YTHDF2Q9Y5A9 579 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 USH1CQ9Y6N9 552 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 HSPG2P98160 4391 aa0.9□□□□□ -2.26
PRPF39-208ENST00000554785 IGLV1-50A0A075B6I6 118 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV3OR15-7A0A075B7D8 119 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 IGLV1-36A0A0B4J1U3 117 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 GOLGA8QA0A0J9YX86 632 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TCRBV4S1A1TA0A5B7 111 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 C5orf49A4QMS7 147 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 LRRN3E7EW58 273 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 H3BSH0 61 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 GOLGA8RI6L899 631 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 M0R2N4 97 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 KCNK2O95069 426 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SCELO95171 688 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CSTAP01040 98 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 PDYNP01213 254 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ARG1P05089 322 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 MRPL3P09001 348 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 FBP1P09467 338 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CT45A6P0DMU7 189 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CT45A5P0DMU8 189 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CT45A7P0DMV0 189 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 PRB4P10163 310 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 NQO1P15559 274 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CFHR2P36980 270 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TGFBR2P37173 567 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 RPS5P46782 204 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 MRPL19P49406 292 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ERFP50548 548 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 P2RX1P51575 399 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CCNG1P51959 295 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CRISP1P54107 249 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 PSMD4P55036 377 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 FOXA1P55317 472 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ESRRGP62508 458 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 BLCAPP62952 87 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TNFAIP6P98066 277 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 HOXC5Q00444 222 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 IFT88Q13099 833 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 PMS2P3Q13401 168 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TRAM2Q15035 370 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 PLECQ15149 4684 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 OR8B8Q15620 311 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF726P1Q15940 193 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 UAP1Q16222 522 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ORMDL2Q53FV1 153 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CT45A1Q5HYN5 189 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 UBE2UQ5VVX9 321 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 GPR107Q5VW38 600 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 STEAP4Q687X5 459 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CEMP1Q6PRD7 247 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 Q6ZR03 302 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 EIF3MQ7L2H7 374 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SSX9Q7RTT3 188 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF695Q8IW36 515 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SLC30A8Q8IWU4 369 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CTAGE3PQ8IX95 158 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 RIMKLAQ8IXN7 391 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 H1FOOQ8IZA3 346 aaPredicted RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 C10orf111Q8N326 155 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 C17orf78Q8N4C9 275 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 MMGT1Q8N4V1 131 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SPICQ8N5J4 248 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SLC30A7Q8NEW0 376 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 OR8B3Q8NGG8 313 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CT45A3Q8NHU0 189 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 SYNPRQ8TBG9 265 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 FAM45AQ8TCE6 357 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 AGR3Q8TD06 166 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TSEN15Q8WW01 171 aaKnown RBP0.9□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM230Q96A57 120 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 MRGPRFQ96AM1 343 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 ZHX1-C8orf76Q96EF9 292 aa0.9□□□□□ -2.27
PRPF39-208ENST00000554785 CERS2Q96G23 380 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms