RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 HLA-CQ95604 372 aa14.36□□□□□ -0.11
PPP4R3A-202ENST00000554390 PRRG4Q9BZD6 226 aa14.36□□□□□ -0.11
PPP4R3A-202ENST00000554390 DNAJC4Q9NNZ3 241 aa14.36□□□□□ -0.11
PPP4R3A-202ENST00000554390 PSG2P11465 335 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 F2RP25116 425 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 HBG1P69891 147 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 HBG2P69892 147 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 TPTE2P1Q5T6R2 138 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 TEX43Q6ZNM6 134 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 WDYHV1Q96HA8 205 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 HES7Q9BYE0 225 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 ZNF552Q9H707 407 aaPredicted RBP14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 DEPPQ9NTK1 212 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 AURKAIP1Q9NWT8 199 aaPredicted RBP14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 MTCH1Q9NZJ7 389 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 CACNG5Q9UF02 275 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 UBE2L5PA0A1B0GUS4 154 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 TAF15Q92804 592 aaKnown RBP eCLIP14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 IL36GQ9NZH8 169 aa14.35□□□□□ -0.11
PPP4R3A-202ENST00000554390 GRIFINA4D1Z8 144 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 SERPINE2P07093 398 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 RAC1P63000 192 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 C11orf42Q8N5U0 333 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 OR1A1Q9P1Q5 309 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 PPP1R3CQ9UQK1 317 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 ZNF716A6NP11 495 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 TUSC2O75896 110 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 FUT6P51993 359 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 LPAL2Q16609 132 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 SPINK14Q6IE38 97 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 SGCZQ96LD1 299 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 ERRFI1Q9UJM3 462 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 LOC102725191A0A1B0GVB3 256 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 C1QTNF9BB2RNN3 333 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 EPHA8P29322 1005 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 TMEM183BQ1AE95 376 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 SPANXN5Q5MJ07 72 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 FBXW9Q5XUX1 488 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 TCF23Q7RTU1 214 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 NUFIP2Q7Z417 695 aaKnown RBP14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 GGNQ86UU5 652 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 OR10V1Q8NGI7 309 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 IMMP1LQ96LU5 166 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 ZFP30Q9Y2G7 519 aa14.34□□□□□ -0.11
PPP4R3A-202ENST00000554390 OR6C6A6NF89 314 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 RAB7AP51149 207 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 PPP1CBP62140 327 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 ZXDAP98168 799 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 COL5A1-AS1Q5SY13 56 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 TMEM42Q69YG0 159 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 CACNA1GO43497 2377 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 ZNF816-ZNF321PA0A0X1KG74 233 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 PAGE4O60829 102 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 VAMP5O95183 116 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 TFF1P04155 84 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 GDF1P27539 372 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 ADMP35318 185 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 CDKN1AP38936 164 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 UBE2NP61088 152 aaKnown RBP14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 IFI44Q8TCB0 444 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 VN1R17PQ8TDU5 208 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 VAMP8Q9BV40 100 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 PHF7Q9BWX1 381 aaPredicted RBP14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 CEP250Q9BV73 2442 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 DMXL2Q8TDJ6 3036 aa14.33□□□□□ -0.12
PPP4R3A-202ENST00000554390 VENTXO95231 258 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 COL8A2P25067 703 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 FOXL2NBQ6ZUU3 175 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 TMEM144Q7Z5S9 345 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 RBM7Q9Y580 266 aaKnown RBP14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 CD300LBA8K4G0 201 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 RHBDL1O75783 438 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 SLC25A6P12236 298 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 NPPCP23582 126 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 SOX8P57073 446 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 RAC3P60763 192 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 Q0VFX4 171 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 SPINK9Q5DT21 86 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 Q6ZS49 121 aa14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 PATZ1Q9HBE1 687 aaKnown RBP14.32□□□□□ -0.12
PPP4R3A-202ENST00000554390 MLF1P58340 268 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 B3GALT5-AS1P59052 145 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 RANP62826 216 aaKnown RBP14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 ARF1P84077 181 aaKnown RBP14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 OR8G2PQ6IF36 304 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 NEIL1Q96FI4 390 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 HSPB9Q9BQS6 159 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 TMEM9BQ9NQ34 198 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 FOXJ2Q9P0K8 574 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 PPIAL4AQ9Y536 164 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 LNP1A1A4G5 178 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 CBR3O75828 277 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 NAPSAO96009 420 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 EGR1P18146 543 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 CHRNB4P30926 498 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 TPPP2P59282 170 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 TP53TG3Q9ULZ0 132 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 CTXND1A0A1B0GTU2 59 aa14.31□□□□□ -0.12
PPP4R3A-202ENST00000554390 LINC00205P59089 165 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms