RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GAL3ST2Q9H3Q3 398 aa13.23□□□□□ -0.29
NEK9-204ENST00000554258 SCPEP1Q9HB40 452 aa13.23□□□□□ -0.29
NEK9-204ENST00000554258 CALYQ9NYX4 217 aa13.23□□□□□ -0.29
NEK9-204ENST00000554258 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
NEK9-204ENST00000554258 MEX3AA1L020 520 aaKnown RBP13.22□□□□□ -0.29
NEK9-204ENST00000554258 CTDSPLO15194 276 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 MMP23AO75900 390 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 PTBP1P26599 531 aaKnown RBP eCLIP13.22□□□□□ -0.29
NEK9-204ENST00000554258 S100A5P33763 92 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 PRSS3P35030 304 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 GNG2P59768 71 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 ERVFRD-1P60508 538 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 C9orf152Q5JTZ5 239 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 PYHIN1Q6K0P9 492 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 ZNF782Q6ZMW2 699 aaPredicted RBP13.22□□□□□ -0.29
NEK9-204ENST00000554258 TRAPPC6BQ86SZ2 158 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 OR52M1Q8NGK5 317 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 ARL11Q969Q4 196 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 TAF9BQ9HBM6 251 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 CHMP1AQ9HD42 196 aaPredicted RBP13.22□□□□□ -0.29
NEK9-204ENST00000554258 MRPS7Q9Y2R9 242 aaKnown RBP13.22□□□□□ -0.29
NEK9-204ENST00000554258 KIAA2026Q5HYC2 2103 aa13.22□□□□□ -0.29
NEK9-204ENST00000554258 A0A087X0M5 115 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 A0A1B0GX30 115 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 SH2D7A6NKC9 451 aaPredicted RBP13.21□□□□□ -0.29
NEK9-204ENST00000554258 IGHV1-8P0DP01 117 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 NAT1P18440 290 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 SSTR5P35346 364 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 GDNFP39905 211 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 CBX5P45973 191 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 MRPS15P82914 257 aaKnown RBP13.21□□□□□ -0.29
NEK9-204ENST00000554258 LDLRAD2Q5SZI1 272 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 HOGA1Q86XE5 327 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 IDI2-AS1Q9NZ38 188 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 KCNIP1Q9NZI2 227 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 HILPDAQ9Y5L2 63 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 SESN1Q9Y6P5 492 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 V9GYH0 126 aa13.21□□□□□ -0.29
NEK9-204ENST00000554258 TNCP24821 2201 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 FABP12A6NFH5 140 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 TRDCB7Z8K6 153 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 DIRAS3O95661 229 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 HBZP02008 142 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 CD34P28906 385 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 MRPS10P82664 201 aaKnown RBP13.2□□□□□ -0.3
NEK9-204ENST00000554258 HTD2P86397 168 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 TMEM30BQ3MIR4 351 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 LY6G6FQ5SQ64 297 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 C5orf24Q7Z6I8 188 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 SNX29P2Q8IUI4 249 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 RFESDQ8TAC1 157 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 RAB9BQ9NP90 201 aa13.2□□□□□ -0.3
NEK9-204ENST00000554258 ZNF230Q9UIE0 474 aaPredicted RBP13.2□□□□□ -0.3
NEK9-204ENST00000554258 IGKV1D-8A0A087WSZ0 117 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 ODF3BA8MYP8 253 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 GABARAPH6UMI1 98 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 SPINT2O43291 252 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 HLA-DRB3P79483 266 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 KIR2DS1Q14954 304 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 Q3ZCU0 254 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 OR52W1Q6IF63 320 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 OR1L1Q8NH94 360 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 SPATA25Q9BR10 227 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 TOLLIPQ9H0E2 274 aa13.19□□□□□ -0.3
NEK9-204ENST00000554258 IGKV1-6A0A0C4DH72 117 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 FABP7O15540 132 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 GSTZ1O43708 216 aaPredicted RBP13.18□□□□□ -0.3
NEK9-204ENST00000554258 IFNA6P05013 189 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 SCTP09683 121 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 GSTT2P0CG29 244 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 GSTT2BP0CG30 244 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 MADCAM1Q13477 382 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 IL18Q14116 193 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 ZNF79Q15937 498 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 GVQW1Q8N7I0 195 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 OR11H6Q8NGC7 330 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 OR4A4PQ8NGN8 299 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 OR8U1Q8NH10 309 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 OR52I2Q8NH67 350 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 SETD6Q8TBK2 473 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 GALMQ96C23 342 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 SLC25A33Q9BSK2 321 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 CABLES2Q9BTV7 478 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 ST6GALNAC5Q9BVH7 336 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 TMEM133Q9H2Q1 129 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 ZNF286AQ9HBT8 521 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
NEK9-204ENST00000554258 INSL3P51460 131 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 UTF1Q5T230 341 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 ZNF626Q68DY1 528 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 MFSD4AQ8N468 514 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 C8orf31Q8N9H6 132 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 OR13D1Q8NGV5 346 aa13.17□□□□□ -0.3
NEK9-204ENST00000554258 UBALD1Q8TB05 177 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms