RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TMEM136Q6ZRR5 245 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 TBC1D26Q86UD7 250 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 CT55Q8WUE5 264 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 Q96M66 194 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 VSTM2LQ96N03 204 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 OR4C12Q96R67 309 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 LSM7Q9UK45 103 aaKnown RBP8.1□□□□□ -1.11
SIX4-202ENST00000554079 ZNF835Q9Y2P0 537 aa8.1□□□□□ -1.11
SIX4-202ENST00000554079 C9orf118A6NHY6 69 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 F2RL2O00254 374 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 PDE6DO43924 150 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 NDUFB4O95168 129 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 CRYAAP02489 173 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 MT-ND6P03923 174 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 CCL1P22362 96 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
SIX4-202ENST00000554079 THBS3P49746 956 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 HERV-K104P61576 105 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
SIX4-202ENST00000554079 DPTQ07507 201 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 KISS1Q15726 138 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 SGCBQ16585 318 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 DCAF12Q5T6F0 453 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 MRPL54Q6P161 138 aaKnown RBP8.09□□□□□ -1.11
SIX4-202ENST00000554079 SCCPDHQ8NBX0 429 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 OR10G3Q8NGC4 313 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 OR8B12Q8NGG6 310 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 OR2AE1Q8NHA4 323 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 FGF14Q92915 247 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
SIX4-202ENST00000554079 COX14Q96I36 57 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 GEMIN7Q9H840 131 aaKnown RBP8.09□□□□□ -1.11
SIX4-202ENST00000554079 HEBP2Q9Y5Z4 205 aa8.09□□□□□ -1.11
SIX4-202ENST00000554079 IGKV1D-43A0A0B4J1Z2 117 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 TEX48A0A1B0GUV7 120 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 PSMB11A5LHX3 300 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 TMEM189A5PLL7 270 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 C2orf72A6NCS6 295 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 KLRC4-KLRK1H3BQV0 150 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 K7EQM0 130 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 BMPR1BO00238 502 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SLC17A3O00476 420 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 IGHG1P01857 330 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SRFP11831 508 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 DRD1P21728 446 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SRIP30626 198 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 PTGDSP41222 190 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 ATP5G3P48201 142 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 CEBPDP49716 269 aaPredicted RBP8.08□□□□□ -1.12
SIX4-202ENST00000554079 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
SIX4-202ENST00000554079 TMEFF1Q8IYR6 380 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 ZNF439Q8NDP4 499 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 ZFYVE21Q9BQ24 234 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 LYRM4Q9HD34 91 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SCRT2Q9NQ03 307 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
SIX4-202ENST00000554079 TRAV36DV7A0A075B6V5 113 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.08□□□□□ -1.12
SIX4-202ENST00000554079 UBE2L5PA0A1B0GUS4 154 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 CRYBB3P26998 211 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 CMPK1P30085 196 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 MYBPHQ13203 477 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 RAB31Q13636 194 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 DMRTC1Q5HYR2 192 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SLC23A3Q6PIS1 610 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 BCORP1Q8N888 145 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 TM4SF19Q96DZ7 209 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 KCNIP2Q9NS61 270 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SLC7A10Q9NS82 523 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 IL36GQ9NZH8 169 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 C1RLQ9NZP8 487 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 CRIM1Q9NZV1 1036 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 NAT8BQ9UHF3 227 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 ERRFI1Q9UJM3 462 aaPredicted RBP8.08□□□□□ -1.12
SIX4-202ENST00000554079 PILRAQ9UKJ1 303 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 SELENOKQ9Y6D0 94 aa8.08□□□□□ -1.12
SIX4-202ENST00000554079 A0A087X0K7 114 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 A0A1W2PR80 420 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 H3BRM9 83 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 HRKO00198 91 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 DXOO77932 396 aaKnown RBP8.07□□□□□ -1.12
SIX4-202ENST00000554079 PPYP01298 95 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 SERPINE2P07093 398 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 PGCP20142 388 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 CCNOP22674 350 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 ZNF121P58317 390 aaPredicted RBP8.07□□□□□ -1.12
SIX4-202ENST00000554079 ARF3P61204 181 aaPredicted RBP8.07□□□□□ -1.12
SIX4-202ENST00000554079 RPS15AP62244 130 aaKnown RBP8.07□□□□□ -1.12
SIX4-202ENST00000554079 SEC11AP67812 179 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 ARF1P84077 181 aaKnown RBP8.07□□□□□ -1.12
SIX4-202ENST00000554079 ODF1Q14990 250 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 NNATQ16517 81 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 RPEL1Q2QD12 228 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 TMEM215Q68D42 235 aa8.07□□□□□ -1.12
SIX4-202ENST00000554079 SLC35E4Q6ICL7 350 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms