RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 GUCA2BQ16661 112 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 HSD17B12Q53GQ0 312 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 TTC32Q5I0X7 151 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 PAGE3Q5JUK9 113 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 FAM201AQ5SY85 155 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 ANKRD22Q5VYY1 191 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 GLYATQ6IB77 296 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 TEX261Q6UWH6 196 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 UGT2A3Q6UWM9 527 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 IGFL2Q6UWQ7 119 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 LINC00173Q6ZV60 143 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 C20orf196Q8IYI0 205 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 LYG1Q8N1E2 194 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 SUMF2Q8NBJ7 301 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 OR2T4Q8NH00 348 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 LINC01006Q8NI28 216 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 ORAOV1Q8WV07 137 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 GEMIN6Q8WXD5 167 aaKnown RBP2.69□□□□□ -1.98
TDP1-207ENST00000553617 SLC7A6Q92536 515 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 BMFQ96LC9 184 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 OR2M4Q96R27 311 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 METTL26Q96S19 204 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 TMEM70Q9BUB7 260 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 SMIM3Q9BZL3 60 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 EFCAB1Q9HAE3 211 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 TMEM100Q9NV29 134 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 MED11Q9P086 117 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 LAMTOR2Q9Y2Q5 125 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 YTHDF2Q9Y5A9 579 aaKnown RBP2.69□□□□□ -1.98
TDP1-207ENST00000553617 ORC6Q9Y5N6 252 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 KCNE3Q9Y6H6 103 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 KIF25-AS1Q9Y6Z4 181 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 NALCNQ8IZF0 1738 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 VWA8A3KMH1 1905 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 A0A087WUU8 490 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 A0A0J9YY10 115 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 A0A1B0GX78 115 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 CIB4A0PJX0 185 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 MYBPHLA2RUH7 354 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 INMT-MINDY4F8WBC2 141 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 I3L4J1 428 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 EIF4EP06730 217 aaKnown RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 MMP7P09237 267 aaPredicted RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 FGF6P10767 208 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 CPMP14384 443 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 EVI2AP22794 236 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 RPS3P23396 243 aaKnown RBP eCLIP2.68□□□□□ -1.98
TDP1-207ENST00000553617 MYL9P24844 172 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 MYCNOSP40205 109 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 GABRA2P47869 451 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 H2BFSP57053 126 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TIMM10P62072 90 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 GNB2P62879 340 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 HBA1P69905 142 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TNFAIP6P98066 277 aaPredicted RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 MEF2CQ06413 473 aaPredicted RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 EBPQ15125 230 aaKnown RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 SSX1Q16384 188 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 KRTAP27-1Q3LI81 207 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 MORN2Q502X0 79 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 NCMAPQ5T1S8 102 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 AVPI1Q5T686 147 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TEX43Q6ZNM6 134 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 H2AFVQ71UI9 128 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 ZNF550Q7Z398 422 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 CROCCP2Q86T23 111 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 C12orf45Q8N5I9 185 aaPredicted RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 OR13C8Q8NGS7 320 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 OR10J6PQ8NGY7 276 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 OR1L1Q8NH94 360 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 ISOC1Q96CN7 298 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 CMBLQ96DG6 245 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 BTN2A3PQ96KV6 586 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 FAM19A4Q96LR4 140 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 RDH12Q96NR8 316 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 LYSMD1Q96S90 227 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 NDFIP1Q9BT67 221 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 GNB1LQ9BYB4 327 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TMEM222Q9H0R3 208 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 OR2D2Q9H210 308 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 CDC42EP4Q9H3Q1 356 aaKnown RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 CST9LQ9H4G1 147 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 CACYBPQ9HB71 228 aaKnown RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 HES4Q9HCC6 221 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 GPR84Q9NQS5 396 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 PRTFDC1Q9NRG1 225 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 MRPL16Q9NX20 251 aaKnown RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 RPS6KB2Q9UBS0 482 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 NAT8BQ9UHF3 227 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TNFSF18Q9UNG2 199 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 BTRCQ9Y297 605 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 RFNGQ9Y644 331 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 ARHGAP23Q9P227 1491 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TMEM131Q92545 1883 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 TP53BP1Q12888 1972 aaPredicted RBP2.68□□□□□ -1.98
TDP1-207ENST00000553617 ADAMTS9Q9P2N4 1935 aa2.68□□□□□ -1.98
TDP1-207ENST00000553617 GRIN2BQ13224 1484 aa2.67□□□□□ -1.98
TDP1-207ENST00000553617 MAGI1Q96QZ7 1491 aaPredicted RBP2.67□□□□□ -1.98
TDP1-207ENST00000553617 MED23Q9ULK4 1368 aa2.67□□□□□ -1.98
TDP1-207ENST00000553617 IGLV1-36A0A0B4J1U3 117 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms