RNA–Protein interactions for RNA: ENST00000553460.5

TMEM55B-203, humanhuman

TSL 5

Gene TMEM55B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-203ENST00000553460 SOCS1O15524 211 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 SOX15O60248 233 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 ARL6IP5O75915 188 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 SPDEFO95238 335 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 PSMA1P25786 263 aaKnown RBP12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 CD40LGP29965 261 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 CEACAM6P40199 344 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 RANBP1P43487 201 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 RAB11BQ15907 218 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 ACTBL2Q562R1 376 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 FAM89BQ8N5H3 189 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 TMEM203Q969S6 136 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 AGMATQ9BSE5 352 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 HDHD3Q9BSH5 251 aaPredicted RBP12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 C11orf54Q9H0W9 315 aaPredicted RBP12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 ZNF221Q9UK13 617 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 HSF4Q9ULV5 492 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 NUBP2Q9Y5Y2 271 aa12.55□□□□□ -0.4
TMEM55B-203ENST00000553460 CPEP16870 476 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 SLURP1P55000 103 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 IRF3Q14653 427 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 UNQ5815/PRO19632Q6UWF5 114 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 OR6Q1Q8NGQ2 317 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 DLX4Q92988 240 aaPredicted RBP12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 PTX4Q96A99 478 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 Q9N2K0 584 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 TPRKBQ9Y3C4 175 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 SORL1Q92673 2214 aa12.54□□□□□ -0.4
TMEM55B-203ENST00000553460 IGHV4OR15-8A0A075B7B6 117 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 A0A087WW49 117 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 FCN1O00602 326 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 APOA2P02652 100 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 HSMCR30P0CW71 290 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 TPPP2P59282 170 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 PITPNAQ00169 270 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 TPBGQ13641 420 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 PSG5Q15238 335 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 AKIRIN2Q53H80 203 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 PDPNQ86YL7 162 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 CASTOR1Q8WTX7 329 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 CMSS1Q9BQ75 279 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 FAM103A1Q9BTL3 118 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 SLA2Q9H6Q3 261 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 GAB2Q9UQC2 676 aa12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-203ENST00000553460 FOXI3A8MTJ6 420 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 ARPC1BO15143 372 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 CA2P00918 260 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 TFAP2AP05549 437 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 SCTP09683 121 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 VEGFCP49767 419 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 RPS25P62851 125 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 MRPS15P82914 257 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 DRAXINQ8NBI3 349 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 LFNGQ8NES3 379 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 ARPC1AQ92747 370 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 ARHGAP5-AS1Q96IT6 56 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 GFI1Q99684 422 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 PECRQ9BY49 303 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 HUWE1Q7Z6Z7 4374 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-203ENST00000553460 TRDCB7Z8K6 153 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 C3orf84H3BNL1 204 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 RGS10O43665 173 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 IGKV1-16P04430 117 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 HSPB1P04792 205 aaKnown RBP12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 GP9P14770 177 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 SPNP16150 400 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 SERPINB10P48595 397 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 RPS16P62249 146 aaKnown RBP12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 MLLT11Q13015 90 aaPredicted RBP12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 FAM3DQ96BQ1 224 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 MS4A10Q96PG2 267 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 OR4C12Q96R67 309 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 RDH8Q9NYR8 311 aa12.51□□□□□ -0.41
TMEM55B-203ENST00000553460 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 M0R1X1 148 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 SLC25A17O43808 307 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 TRGV3P03979 118 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 CALRP27797 417 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 PSMD7P51665 324 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 TMEM50BP56557 158 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 CLDN12P56749 244 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
TMEM55B-203ENST00000553460 GRPEL2Q8TAA5 225 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms