RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ISOC1Q96CN7 298 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 PIPOXQ9P0Z9 390 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 ABRACLQ9P1F3 81 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 RNF150Q9ULK6 438 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 A0A1W2PN81 502 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 A0A1W2PPK0 400 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 RRHO14718 337 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 RAB29O14966 203 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 RBBP9O75884 186 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 GABARAPO95166 117 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 LYL1P12980 280 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 MC5RP33032 325 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 CHRNA7P36544 502 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 SLURP1P55000 103 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 CX3CL1P78423 397 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 ECSCRQ19T08 205 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 ZFP41Q8N8Y5 198 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
PTCH1-218ENST00000548945 NEDD4LQ96PU5 975 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 CITED4Q96RK1 184 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 RNF5Q99942 180 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 ALX4Q9H161 411 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-218ENST00000548945 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 NDUFB11Q9NX14 153 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 FBXO7Q9Y3I1 522 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 NUBP2Q9Y5Y2 271 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 SACSQ9NZJ4 4579 aa9.92□□□□□ -0.82
PTCH1-218ENST00000548945 ITGB1BP1O14713 200 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 HSPB1P04792 205 aaKnown RBP9.91□□□□□ -0.82
PTCH1-218ENST00000548945 PITPNAQ00169 270 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 SSX1Q16384 188 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 AKIRIN2Q53H80 203 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 LIPKQ5VXJ0 399 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 FAM131AQ6UXB0 335 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 MOB1BQ7L9L4 216 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 OVCH2Q7RTZ1 564 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 ARPC1AQ92747 370 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 FAM46BQ96A09 425 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 SULT4A1Q9BR01 284 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 SLA2Q9H6Q3 261 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 SLC23A1Q9UHI7 598 aa9.91□□□□□ -0.82
PTCH1-218ENST00000548945 IGHV4OR15-8A0A075B7B6 117 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 A0A087WW49 117 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 A8MZ25 164 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 H3BMQ9 156 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 AIREO43918 545 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 NAPSAO96009 420 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 CT45A6P0DMU7 189 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 CT45A5P0DMU8 189 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 CT45A7P0DMV0 189 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-218ENST00000548945 CELP19835 753 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 GADD45AP24522 165 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 PSMA1P25786 263 aaKnown RBP9.9□□□□□ -0.82
PTCH1-218ENST00000548945 CD40LGP29965 261 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 PLGLAQ15195 96 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 ACTBL2Q562R1 376 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 ZNF880Q6PDB4 577 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 ZNF562Q6V9R5 426 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 C5orf24Q7Z6I8 188 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 OR5AN1Q8NGI8 311 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 OR4C12Q96R67 309 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 TM2D3Q9BRN9 247 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 NAA50Q9GZZ1 169 aaKnown RBP9.9□□□□□ -0.82
PTCH1-218ENST00000548945 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-218ENST00000548945 STUB1Q9UNE7 303 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.82
PTCH1-218ENST00000548945 PNMA8CA0A1B0GUJ8 204 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 H0YJW9 148 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 SLC22A1O15245 554 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 ST8SIA5O15466 376 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 HSPA12AO43301 675 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 GSTP1P09211 210 aaKnown RBP9.89□□□□□ -0.83
PTCH1-218ENST00000548945 RPS27AP62979 156 aaKnown RBP9.89□□□□□ -0.83
PTCH1-218ENST00000548945 TRAM1Q15629 374 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 CTF1Q16619 201 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 CNPY1Q3B7I2 92 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 RPL39P5Q59GN2 51 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 C1orf100Q5SVJ3 147 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 PPP1R27Q86WC6 154 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 KCNG3Q8TAE7 436 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 CYYR1Q96J86 154 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 RHOVQ96L33 236 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 AGMATQ9BSE5 352 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 FAAP24Q9BTP7 215 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 ELOVL1Q9BW60 279 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 TM2D1Q9BX74 207 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 TMEM59Q9BXS4 323 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 PALMDQ9NP74 551 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
PTCH1-218ENST00000548945 TRBV6-6A0A0A6YYG2 114 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 LCE6AA0A183 80 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 H7C2Y5 167 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 FCN1O00602 326 aa9.88□□□□□ -0.83
PTCH1-218ENST00000548945 SPDEFO95238 335 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms