RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 EDARADDQ8WWZ3 215 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 TOLLIPQ9H0E2 274 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 C11orf54Q9H0W9 315 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 PLGRKTQ9HBL7 147 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 Q9N2K0 584 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 A3GALT2U3KPV4 340 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 OVOL1O14753 267 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 PROP1O75360 226 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 ZBTB25P24278 435 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 SLURP1P55000 103 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 PLGLAQ15195 96 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 PTX4Q96A99 478 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 GHITMQ9H3K2 345 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 DUSP21Q9H596 190 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 TPSG1Q9NRR2 321 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 MGAT4AQ9UM21 535 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 AK6Q9Y3D8 172 aaKnown RBP13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 NUBP2Q9Y5Y2 271 aa13.45□□□□□ -0.26
CHMP1A-205ENST00000548650 IGHV4OR15-8A0A075B7B6 117 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 A0A087WW49 117 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 IGKV1-6A0A0C4DH72 117 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 H7C2Y5 167 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 IGKV1-16P04430 117 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 GSTP1P09211 210 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 SCTP09683 121 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 TMEM50BP56557 158 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 CLDN12P56749 244 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 RAB11BQ15907 218 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 PLAC9Q5JTB6 97 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 DRAXINQ8NBI3 349 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 DLX4Q92988 240 aaPredicted RBP13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 ARHGAP5-AS1Q96IT6 56 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 FAM103A1Q9BTL3 118 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 PECRQ9BY49 303 aa13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
CHMP1A-205ENST00000548650 LINC01619G3V211 115 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 LDLRAD4O15165 306 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 HSPA12AO43301 675 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 RGS10O43665 173 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 ARL6IP5O75915 188 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 SPDEFO95238 335 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 LY86O95711 162 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 CA2P00918 260 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 HSMCR30P0CW71 290 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 CPEP16870 476 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 PSMA1P25786 263 aaKnown RBP13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 CEACAM6P40199 344 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 VEGFCP49767 419 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 MLLT11Q13015 90 aaPredicted RBP13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 PSG5Q15238 335 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 TRAM1Q15629 374 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 PYHIN1Q6K0P9 492 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 PPP1R27Q86WC6 154 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 ZNF383Q8NA42 475 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 ASCL2Q99929 193 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 RNF5Q99942 180 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 METTL1Q9UBP6 276 aaKnown RBP13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 TPRKBQ9Y3C4 175 aa13.43□□□□□ -0.26
CHMP1A-205ENST00000548650 SAP30O75446 220 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 LINC00205P59089 165 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 FABP5Q01469 135 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 PLA2G7Q13093 441 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 ACTBL2Q562R1 376 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 FAM3DQ96BQ1 224 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 CMSS1Q9BQ75 279 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 RNF150Q9ULK6 438 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 SMAD5-AS1Q9Y6J3 95 aa13.42□□□□□ -0.26
CHMP1A-205ENST00000548650 IGHV3-11P01762 117 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 TMEM267Q0VDI3 215 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 ZNF562Q6V9R5 426 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 PDPNQ86YL7 162 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 LFNGQ8NES3 379 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 OR56B1Q8NGI3 324 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 CLCC1Q96S66 551 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 TSNAXQ99598 290 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 RDH8Q9NYR8 311 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 ZNF221Q9UK13 617 aa13.41□□□□□ -0.26
CHMP1A-205ENST00000548650 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 APOA2P02652 100 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 TFAP2AP05549 437 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 SPNP16150 400 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 CRHBPP24387 322 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 MAP2K4P45985 399 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 TPPP2P59282 170 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 SSBP2P81877 361 aaPredicted RBP13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 ACSM6Q6P461 480 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 PRSS48Q7RTY5 328 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 MGLLQ99685 303 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 CABLES2Q9BTV7 478 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 KCNK7Q9Y2U2 307 aa13.4□□□□□ -0.26
CHMP1A-205ENST00000548650 DNAH7Q8WXX0 4024 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 TMEM272A0A1B0GTI8 110 aa13.39□□□□□ -0.27
CHMP1A-205ENST00000548650 M0R1X1 148 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms