RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TMEM30CPA0ZSE6 113 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 GEMIN2O14893 280 aaKnown RBP12.8□□□□□ -0.36
SSH1-208ENST00000548522 GSTZ1O43708 216 aaPredicted RBP12.8□□□□□ -0.36
SSH1-208ENST00000548522 CD2P06729 351 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 TRAPPC2P0DI81 140 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 TRAPPC2BP0DI82 140 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 RAB3AP20336 220 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 KIAA0141Q14154 515 aaPredicted RBP12.8□□□□□ -0.36
SSH1-208ENST00000548522 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 LRRTM1Q86UE6 522 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 SAMD12Q8N8I0 201 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 DEDD2Q8WXF8 326 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 NEURL2Q9BR09 285 aa12.8□□□□□ -0.36
SSH1-208ENST00000548522 C7orf50Q9BRJ6 194 aaKnown RBP12.8□□□□□ -0.36
SSH1-208ENST00000548522 A0A1W2PP11 408 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 G3V318 75 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 IGF1P05019 195 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 CD1BP29016 333 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 RBM11P57052 281 aaKnown RBP12.79□□□□□ -0.36
SSH1-208ENST00000548522 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 CADM3Q8N126 398 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 OR10V1Q8NGI7 309 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 WSB1Q9Y6I7 421 aa12.79□□□□□ -0.36
SSH1-208ENST00000548522 I3L521 148 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 EIF4EP06730 217 aaKnown RBP12.78□□□□□ -0.36
SSH1-208ENST00000548522 HNRNPCP07910 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
SSH1-208ENST00000548522 RFX2P48378 723 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 ZNF134P52741 427 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 C8orf31Q8N9H6 132 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 OR52M1Q8NGK5 317 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 OR1N2Q8NGR9 330 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 TRIM63Q969Q1 353 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 TMEM106AQ96A25 262 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 ORAI1Q96D31 301 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 GFI1Q99684 422 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 ALX4Q9H161 411 aaPredicted RBP12.78□□□□□ -0.36
SSH1-208ENST00000548522 IFT22Q9H7X7 185 aa12.78□□□□□ -0.36
SSH1-208ENST00000548522 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
SSH1-208ENST00000548522 AK6Q9Y3D8 172 aaKnown RBP12.78□□□□□ -0.36
SSH1-208ENST00000548522 C12orf77C9JDV5 145 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 FRMD6-AS1P0C7T7 363 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 IGFBP3P17936 291 aaPredicted RBP12.77□□□□□ -0.37
SSH1-208ENST00000548522 GZMHP20718 246 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 SERPINA2P20848 420 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 IL3RAP26951 378 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 CNTFRP26992 372 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.37
SSH1-208ENST00000548522 ZNF616Q08AN1 781 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 P2RY14Q15391 338 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 CT45A1Q5HYN5 189 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 NHLRC3Q5JS37 347 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 SLC25A48Q6ZT89 311 aaKnown RBP12.77□□□□□ -0.37
SSH1-208ENST00000548522 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 NKAIN3Q8N8D7 197 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 ZNF491Q8N8L2 437 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 CT45A3Q8NHU0 189 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 RITA1Q96K30 269 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 CKLFQ9UBR5 152 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 ING4Q9UNL4 249 aa12.77□□□□□ -0.37
SSH1-208ENST00000548522 ATP6V0E1O15342 81 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 PLA2G10O15496 165 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 MT-ND4P03905 459 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 SPNP16150 400 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 ZNF137PP52743 207 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 MMDQ15546 238 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 ATAD3CQ5T2N8 411 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 ZFAND6Q6FIF0 208 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 LGALS14Q8TCE9 139 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 DCUN1D4Q92564 292 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 CPNE2Q96FN4 548 aaPredicted RBP12.76□□□□□ -0.37
SSH1-208ENST00000548522 UBE2E2Q96LR5 201 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
SSH1-208ENST00000548522 PARP11Q9NR21 331 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 STEAP1Q9UHE8 339 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
SSH1-208ENST00000548522 LCE6AA0A183 80 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 SLC17A2O00624 439 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 LYRM1O43325 122 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 ORC5O43913 435 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 LYL1P12980 280 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 SNRPBP14678 240 aaKnown RBP12.75□□□□□ -0.37
SSH1-208ENST00000548522 INPP1P49441 399 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 SLURP1P55000 103 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 DYRK1AQ13627 763 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 C5orf24Q7Z6I8 188 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 CDH26Q8IXH8 852 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 OR5H6Q8NGV6 325 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 OR1L1Q8NH94 360 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 ENKURQ8TC29 256 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 CASTOR1Q8WTX7 329 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms