RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SPAG16Q8N0X2 631 aa17.33■□□□□ 0.37
RITA1-201ENST00000548278 LINC00052Q96N35 136 aa17.33■□□□□ 0.37
RITA1-201ENST00000548278 TAS2R3Q9NYW6 316 aa17.33■□□□□ 0.37
RITA1-201ENST00000548278 CLN8Q9UBY8 286 aa17.33■□□□□ 0.37
RITA1-201ENST00000548278 MMP24Q9Y5R2 645 aa17.33■□□□□ 0.37
RITA1-201ENST00000548278 ARFGEF3Q5TH69 2177 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 TRGV10A0A0A0MS01 117 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 ZNF705EA8MWA4 302 aaPredicted RBP17.33■□□□□ 0.36
RITA1-201ENST00000548278 TMEM178BH3BS89 294 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 P0C879 139 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 ZP3P21754 424 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 ZNF134P52741 427 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 ZNF816Q0VGE8 651 aaPredicted RBP17.33■□□□□ 0.36
RITA1-201ENST00000548278 EFNB3Q15768 340 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 CCDC28AQ8IWP9 274 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 SMIM8Q96KF7 97 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 GINS3Q9BRX5 216 aa17.33■□□□□ 0.36
RITA1-201ENST00000548278 TRAV38-1A0A0B4J264 116 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 PLAUP00749 431 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 GPR12P47775 334 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 SULT1A2P50226 295 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 LINC00205P59089 165 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 LY6DQ14210 128 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 SAT2Q96F10 170 aaPredicted RBP17.32■□□□□ 0.36
RITA1-201ENST00000548278 RAB40CQ96S21 281 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 RAB9BQ9NP90 201 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 DYNLRB1Q9NP97 96 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 COA4Q9NYJ1 87 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 S1PR2O95136 353 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 CLDN14O95500 239 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 UTF1Q5T230 341 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 C1orf87Q8N0U7 546 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 IFI27L2Q9H2X8 130 aa17.32■□□□□ 0.36
RITA1-201ENST00000548278 NKX6-3A6NJ46 265 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 B8ZZF3 427 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 SIAH2O43255 324 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 BAXQ07812 192 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 CORO2AQ92828 525 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 MARC2Q969Z3 335 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 MS4A5Q9H3V2 200 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 LINC00574Q9H8X3 128 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 TMEM106BQ9NUM4 274 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 GFOD1Q9NXC2 390 aa17.31■□□□□ 0.36
RITA1-201ENST00000548278 PPIAL4EA0A075B759 164 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 B9A039 149 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 KRBOX1C9JBD0 128 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 PPIAL4DF5H284 164 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 ITGB1BP1O14713 200 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 TMPRSS2O15393 492 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 KRASP01116 189 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 IGHV3-7P01780 117 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 PPIAL4FP0DN26 164 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 SFTPCP11686 197 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 DUTP33316 252 aaKnown RBP17.3■□□□□ 0.36
RITA1-201ENST00000548278 G6PCP35575 357 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 PPIAL4AQ9Y536 164 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 SYNGR2O43760 224 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 CST7O76096 145 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 SEC11BP0C7V7 166 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 SPP1P10451 314 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 CLINT1Q14677 625 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 NCR3LG1Q68D85 454 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 CCL17Q92583 94 aa17.3■□□□□ 0.36
RITA1-201ENST00000548278 COL6A6A6NMZ7 2263 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 ANKHD1Q8IWZ3 2542 aaKnown RBP17.29■□□□□ 0.36
RITA1-201ENST00000548278 TOR1AO14656 332 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 SLC31A2O15432 143 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 ATG12O94817 140 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 CISD1Q9NZ45 108 aaKnown RBP17.29■□□□□ 0.36
RITA1-201ENST00000548278 WSB1Q9Y6I7 421 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 KALRNO60229 2985 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 RELNP78509 3460 aa17.29■□□□□ 0.36
RITA1-201ENST00000548278 RAB19A4D1S5 217 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 ZNF729A6NN14 1252 aaPredicted RBP17.28■□□□□ 0.36
RITA1-201ENST00000548278 TNFRSF13BO14836 293 aaPredicted RBP17.28■□□□□ 0.36
RITA1-201ENST00000548278 TXNL1O43396 289 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 MED6O75586 246 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 DYNLT3P51808 116 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 RPL23AP62750 156 aaKnown RBP17.28■□□□□ 0.36
RITA1-201ENST00000548278 PXDC1Q5TGL8 231 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 OR5C1Q8NGR4 320 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 LEAP2Q969E1 77 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 KCNJ16Q9NPI9 418 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 FAM90A26D6RGX4 464 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 MIDNQ504T8 468 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 RPL39P5Q59GN2 51 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 CT45A1Q5HYN5 189 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 CT45A3Q8NHU0 189 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 CD300LFQ8TDQ1 290 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 CA5BP1Q8WTZ4 195 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 ABHD14AQ9BUJ0 271 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 SLC25A10Q9UBX3 287 aaPredicted RBP17.28■□□□□ 0.36
RITA1-201ENST00000548278 GAB2Q9UQC2 676 aa17.28■□□□□ 0.36
RITA1-201ENST00000548278 FCN3O75636 299 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 NDUFB7P17568 137 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 RAB7AP51149 207 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 ZNF266Q14584 549 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 TUSC1Q2TAM9 212 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 TMEM217Q8N7C4 229 aa17.27■□□□□ 0.36
RITA1-201ENST00000548278 HSD17B11Q8NBQ5 300 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms