RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CEACAM19Q7Z692 300 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 LRRTM1Q86UE6 522 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 OR2AK2Q8NG84 335 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 RHOVQ96L33 236 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 NEDD4LQ96PU5 975 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 SULT4A1Q9BR01 284 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 C19orf73Q9NVV2 129 aa9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 METTL1Q9UBP6 276 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 LSM2Q9Y333 95 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-205ENST00000548277 CSMD3Q7Z407 3707 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 UBBP0CG47 229 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 AQP4P55087 323 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 LINC00205P59089 165 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 RPS27AP62979 156 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 HTD2P86397 168 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 HSD17B12Q53GQ0 312 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 C1orf100Q5SVJ3 147 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 DRAXINQ8NBI3 349 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 OR5T1Q8NG75 326 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 NRG4Q8WWG1 115 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 PHYHIPQ92561 330 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 TMEM59Q9BXS4 323 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 IFI27L2Q9H2X8 130 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 KCNK15Q9H427 330 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 TUBA4BQ9H853 241 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 CHMP1AQ9HD42 196 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 RETNQ9HD89 108 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 ABRACLQ9P1F3 81 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 STEAP1Q9UHE8 339 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 RNF150Q9ULK6 438 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 STUB1Q9UNE7 303 aa9.16□□□□□ -0.94
TRAFD1-205ENST00000548277 HSPA12AO43301 675 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 CA2P00918 260 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 HTR2CP28335 458 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 CD40LGP29965 261 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 RPS16P62249 146 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 UNC119Q13432 240 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 IRF3Q14653 427 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 HAGHQ16775 308 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 LIPKQ5VXJ0 399 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 C6orf201Q7Z4U5 140 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 ZNF554Q86TJ5 538 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 TCTEX1D1Q8N7M0 179 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 GRPEL2Q8TAA5 225 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 KCNG3Q8TAE7 436 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 TMEM203Q969S6 136 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 SPATA25Q9BR10 227 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 NICN1Q9BSH3 213 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 PIPOXQ9P0Z9 390 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 ADAM30Q9UKF2 790 aa9.15□□□□□ -0.94
TRAFD1-205ENST00000548277 LYSTQ99698 3801 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 C13orf42A0A1B0GVH6 325 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 H0YJW9 148 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 RAB29O14966 203 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 SLC22A1O15245 554 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 IGLV1-51P01701 117 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 UCHL1P09936 223 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 HSMCR30P0CW71 290 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 CD37P11049 281 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 CRIP2P52943 208 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 FXYD3Q14802 87 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 PSG5Q15238 335 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 HMGN3Q15651 99 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 AKIRIN2Q53H80 203 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 PYHIN1Q6K0P9 492 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 CD200R1LQ6Q8B3 271 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 UFD1Q92890 307 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 RANGRFQ9HD47 186 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 SLC23A1Q9UHI7 598 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 WASHC3Q9Y3C0 194 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 TPRKBQ9Y3C4 175 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 LRRC42Q9Y546 428 aa9.14□□□□□ -0.95
TRAFD1-205ENST00000548277 A0A0A6YYD4 124 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 IZUMO1RA6ND01 250 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 TMEM14DPA8MWL7 114 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 ARPC1BO15143 372 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 CNIH1O95406 144 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 BPNT1O95861 308 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 IFNA6P05013 189 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 CPEP16870 476 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 MC5RP33032 325 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 CEACAM6P40199 344 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 VEGFCP49767 419 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 SYNJ2BPP57105 145 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 QRFPP83859 136 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 TPBGQ13641 420 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 P2RY14Q15391 338 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 ZNF562Q6V9R5 426 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 TMEM91Q6ZNR0 172 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 OR6M1Q8NGM8 313 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 DUSP21Q9H596 190 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 PLEKHJ1Q9NW61 149 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 OR1A1Q9P1Q5 309 aa9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 AK6Q9Y3D8 172 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-205ENST00000548277 OR5H14A6NHG9 310 aa9.12□□□□□ -0.95
TRAFD1-205ENST00000548277 SOCS1O15524 211 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms