RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 FAM74A1Q5RGS3 127 aa14.34□□□□□ -0.11
RBFOX1-207ENST00000547338 CCL28Q9NRJ3 127 aa14.34□□□□□ -0.11
RBFOX1-207ENST00000547338 SVEP1Q4LDE5 3571 aa14.33□□□□□ -0.11
RBFOX1-207ENST00000547338 A0A1B0GU03 582 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 C17orf100A8MU93 164 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 GRPP07492 148 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 IL2RGP31785 369 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 TUSC1Q2TAM9 212 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 PRIMA1Q86XR5 153 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 C11orf53Q8IXP5 236 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 TCTEX1D1Q8N7M0 179 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 LHFPL5Q8TAF8 219 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 LSM10Q969L4 123 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 LINC00052Q96N35 136 aa14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 FAM212BQ9NTI7 297 aaPredicted RBP14.33□□□□□ -0.12
RBFOX1-207ENST00000547338 MXRA5Q9NR99 2828 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 IGKV1D-13A0A0B4J2D9 117 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 OOEPA6NGQ2 149 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 ZSCAN5BA6NJL1 495 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 HSPB6O14558 160 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 MLNRO43193 412 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 ZNF205O95201 554 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 SCGB1D2O95969 90 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 IGKV1-13P0DP09 117 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 RCC1P18754 421 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 ID3Q02535 119 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 SMIM21Q3B7S5 101 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 NMSQ5H8A3 153 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 RPL7L1Q6DKI1 246 aaKnown RBP14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 ACP7Q6ZNF0 438 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 FOXRED2Q8IWF2 684 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 COMMD1Q8N668 190 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 TMED6Q8WW62 240 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 NARFLQ9H6Q4 476 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 PARP11Q9NR21 331 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 FBXL17Q9UF56 701 aa14.32□□□□□ -0.12
RBFOX1-207ENST00000547338 SIRPB1O00241 398 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 KCNAB3O43448 404 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 CRLF1O75462 422 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 SERPINE2P07093 398 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 ZNF16P17020 682 aaPredicted RBP14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 CCL8P80075 99 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 BAXQ07812 192 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 SPRNQ5BIV9 151 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 PLPPR1Q8TBJ4 325 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 C11orf1Q9H5F2 150 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 OR2S2Q9NQN1 319 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 YAE1D1Q9NRH1 226 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 LIN7CQ9NUP9 197 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 ZNF705EA8MWA4 302 aaPredicted RBP14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 HSD17B6O14756 317 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 WNT9BO14905 357 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 HSPA12AO43301 675 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 IGHV1-46P01743 117 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 MRPS11P82912 194 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 ZNF266Q14584 549 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 WDR82Q6UXN9 313 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 SPAG16Q8N0X2 631 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 OR2C3Q8N628 320 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 DMBX1Q8NFW5 382 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 OR52M1Q8NGK5 317 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 OR1S2Q8NGQ3 325 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 PPP1R35Q8TAP8 253 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 GALMQ96C23 342 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 NCOR1P1Q9H4R4 102 aa14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 RCL1Q9Y2P8 373 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-207ENST00000547338 CUBNO60494 3623 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 H0YL77 283 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 ATG12O94817 140 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 SELENOVP59797 346 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 VAMP2P63027 116 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 PJVKQ0ZLH3 352 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 CHODLQ9H9P2 273 aa14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 STRAPQ9Y3F4 350 aaKnown RBP14.3□□□□□ -0.12
RBFOX1-207ENST00000547338 FBN1P35555 2871 aaKnown RBP14.29□□□□□ -0.12
RBFOX1-207ENST00000547338 ADH4P08319 380 aa14.29□□□□□ -0.12
RBFOX1-207ENST00000547338 F2RL1P55085 397 aa14.29□□□□□ -0.12
RBFOX1-207ENST00000547338 Q6ZR03 302 aa14.29□□□□□ -0.12
RBFOX1-207ENST00000547338 MSL2Q9HCI7 577 aa14.29□□□□□ -0.12
RBFOX1-207ENST00000547338 LYRM2Q9NU23 88 aaPredicted RBP14.29□□□□□ -0.12
RBFOX1-207ENST00000547338 TANC2Q9HCD6 1990 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 PITX3O75364 302 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 CYB5R2Q6BCY4 276 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 LYPD6BQ8NI32 183 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 C1orf159Q96HA4 380 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 RAB40CQ96S21 281 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 RAB9BQ9NP90 201 aa14.28□□□□□ -0.12
RBFOX1-207ENST00000547338 TMEM218A2RU14 115 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 A6NLC8 198 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 KIAA1324LA8MWY0 1029 aaPredicted RBP14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 TRIM77I1YAP6 450 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 LGALS8O00214 317 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 ADAM20O43506 726 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 SPRY3O43610 288 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 SPP1P10451 314 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 CEACAM6P40199 344 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 CAV2P51636 162 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 FAM219AQ8IW50 185 aa14.27□□□□□ -0.12
RBFOX1-207ENST00000547338 BPIFCQ8NFQ6 507 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms