RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 CD5LO43866 347 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 IL5P05113 134 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 ANXA3P12429 323 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 AKR1C4P17516 323 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 PI3P19957 117 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 EPHA1P21709 976 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 KLRD1Q13241 179 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 ODF3L1Q8IXM7 274 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 TCTEX1D1Q8N7M0 179 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 OR4P4Q8NGL7 312 aa12.88□□□□□ -0.35
TRAFD1-203ENST00000547063 IGHV1-69DA0A0B4J2H0 117 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 M0R1X1 148 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 MPPED1O15442 326 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 PGLYRP1O75594 196 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 IGLV2-14P01704 120 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 IGHV1-69P01742 117 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 GAPDHP04406 335 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 FOSL1P15407 271 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 THBS3P49746 956 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 ARHGDIBP52566 201 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 DLX1P56177 255 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 TAGLNQ01995 201 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 DHODHQ02127 395 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 C4orf46Q504U0 113 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 CCDC144NLQ6NUI1 221 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 ZNF833PQ6ZTB9 187 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 RPEQ96AT9 228 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 LIN7CQ9NUP9 197 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 PRELID3BQ9Y3B1 194 aa12.87□□□□□ -0.35
TRAFD1-203ENST00000547063 ABCA1O95477 2261 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 NBPF19A0A087WUL8 3843 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 TRAV40A0A0B4J280 105 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 NPFFO15130 113 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 OR4E1P0C645 316 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 ANXA7P20073 488 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 VAMP1P23763 118 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 F2RP25116 425 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 KIR2DS2P43631 304 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 RAB25P57735 213 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 ZNF816Q0VGE8 651 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 GLDNQ6ZMI3 551 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 TBC1D26Q86UD7 250 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 TGIF2LXQ8IUE1 241 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 ADAD2Q8NCV1 583 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 NANPQ8TBE9 248 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 CD300LFQ8TDQ1 290 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 MALSU1Q96EH3 234 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 GALNT14Q96FL9 552 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 ZNF251Q9BRH9 671 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 FAM212BQ9NTI7 297 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-203ENST00000547063 CSMD2Q7Z408 3487 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 C3orf85A0A1B0GTC6 90 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 IFNA2P01563 188 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 SRPXP78539 464 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 PRB3Q04118 309 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 CBX3Q13185 183 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 TATDN3Q17R31 274 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 TPTE2P1Q5T6R2 138 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 LYG2Q86SG7 212 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 PDZD9Q8IXQ8 264 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 TCTEX1D2Q8WW35 142 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
TRAFD1-203ENST00000547063 SNRPGP15A8MWD9 76 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 H0Y980 276 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 TNFSF12O43508 249 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 SFT2D2O95562 160 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 APOA2P02652 100 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 RRASP10301 218 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 MC5RP33032 325 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 SAA4P35542 130 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 PPP1R1AQ13522 171 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 EIF4EBP1Q13541 118 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 Q6ZNX1 250 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 CAPSLQ8WWF8 208 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 BEX2Q9BXY8 128 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 BEX1Q9HBH7 125 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 ZNRD1Q9P1U0 126 aa12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-203ENST00000547063 A0A1W2PRD5 423 aa12.83□□□□□ -0.36
TRAFD1-203ENST00000547063 A0A1W2PRF3 423 aa12.83□□□□□ -0.36
TRAFD1-203ENST00000547063 A0A1W2PRM7 423 aa12.83□□□□□ -0.36
TRAFD1-203ENST00000547063 C9orf170A2RU37 121 aa12.83□□□□□ -0.36
TRAFD1-203ENST00000547063 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAFD1-203ENST00000547063 PROP1O75360 226 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms