RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 MC5RP33032 325 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 HRH1P35367 487 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 ETV6P41212 452 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 TAS2R19P59542 299 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 DGCR2P98153 550 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
PTCH1-213ENST00000546820 HABP2Q14520 560 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-213ENST00000546820 CNPY1Q3B7I2 92 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 RPL39P5Q59GN2 51 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 C16orf82Q7Z2V1 217 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 TMEM17Q86X19 198 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 TMEM229BQ8NBD8 167 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 OR2T10Q8NGZ9 312 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 BORCS5Q969J3 196 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 MOSP00540 346 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 PPYP01298 95 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 SNRNP70P08621 437 aaKnown RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 TMEM11P17152 192 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 AADACP22760 399 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 HERV-K104P61576 105 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 TAGLNQ01995 201 aaKnown RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 KRTAP21-3Q3LHN1 58 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 RNASE10Q5GAN6 216 aaKnown RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 VAX1Q5SQQ9 334 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 DHRS7BQ6IAN0 325 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 LINC00299Q6ZSB3 139 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 CFHR4Q92496 578 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 ADTRPQ96IZ2 230 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 RBM14Q96PK6 669 aaKnown RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 NABP2Q9BQ15 211 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF251Q9BRH9 671 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 THAP7Q9BT49 309 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 MRPL20Q9BYC9 149 aaKnown RBP11.05□□□□□ -0.64
PTCH1-213ENST00000546820 ZFHX3Q15911 3703 aa11.05□□□□□ -0.64
PTCH1-213ENST00000546820 IGHV3-72A0A0B4J1Y9 119 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 OR5H14A6NHG9 310 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 RNF212BA8MTL3 300 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 M0QZK8 103 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 M0R1X1 148 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 RAB3DO95716 219 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 IGKV1D-33P01593 117 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 IGKV1-33P01594 117 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 CD3DP04234 171 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 CT45A6P0DMU7 189 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 CT45A5P0DMU8 189 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 CT45A7P0DMV0 189 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 LSAMPQ13449 338 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 EBI3Q14213 229 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 LPCAT3Q6P1A2 487 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 CCBE1Q6UXH8 406 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-213ENST00000546820 TMEM219Q86XT9 240 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 Q8N402 240 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 ZBTB34Q8NCN2 500 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 SECTM1Q8WVN6 248 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-213ENST00000546820 NPFFR1Q9GZQ6 430 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 SLC5A7Q9GZV3 580 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 C1RLQ9NZP8 487 aa11.04□□□□□ -0.64
PTCH1-213ENST00000546820 H7C2Y5 167 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 OR2F2O95006 317 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 APOA2P02652 100 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 HKR1P10072 659 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 RRASP10301 218 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 THBS3P49746 956 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 FXYD4P59646 89 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 AP3S2P59780 193 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF45Q02386 682 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 FOXL1Q12952 345 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 CBX3Q13185 183 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 HNF4GQ14541 408 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 MEF2DQ14814 521 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 MSMO1Q15800 293 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 KRTAP24-1Q3LI83 254 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 STEAP1BQ6NZ63 245 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 ARRDC1Q8N5I2 433 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 OR8H1Q8NGG4 311 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 OR5AN1Q8NGI8 311 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 EAF1Q96JC9 268 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-213ENST00000546820 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 PTTG2Q9NZH5 202 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 RBMX2Q9Y388 322 aaKnown RBP11.03□□□□□ -0.64
PTCH1-213ENST00000546820 V9GYH0 126 aa11.03□□□□□ -0.64
PTCH1-213ENST00000546820 IGKV1D-13A0A0B4J2D9 117 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 M0QYG6 137 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 PROP1O75360 226 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 CD74P04233 296 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 AKAIN1P0CW23 69 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 IGKV1-13P0DP09 117 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 S100GP29377 79 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 ZNF660Q6AZW8 331 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-213ENST00000546820 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-213ENST00000546820 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-213ENST00000546820 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 OR4F5Q8NH21 305 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 MOB3AQ96BX8 217 aa11.02□□□□□ -0.65
PTCH1-213ENST00000546820 RNF5Q99942 180 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms