RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 LCN8Q6JVE9 175 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 C2orf91Q6ZV80 131 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 NATD1Q8N6N6 113 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 ZNF283Q8N7M2 679 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 CCDC112Q8NEF3 446 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 LFNGQ8NES3 379 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 ATP6V1C2Q8NEY4 427 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 OR52B2Q96RD2 323 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 GPR22Q99680 433 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 NKX6-2Q9C056 277 aaPredicted RBP0.85□□□□□ -2.27
CCDC38-204ENST00000546816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.85□□□□□ -2.27
CCDC38-204ENST00000546816 FAM215AQ9Y5M1 114 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 PXDNLA1KZ92 1463 aa0.85□□□□□ -2.27
CCDC38-204ENST00000546816 DSCAML1Q8TD84 2053 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 NCKAP5O14513 1909 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 COPEO14579 308 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 NEMFO60524 1076 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 NAPSAO96009 420 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 ORM1P02763 201 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 CRYBA1P05813 215 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 ALOX5APP20292 161 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 CFL1P23528 166 aaKnown RBP0.84□□□□□ -2.27
CCDC38-204ENST00000546816 F8A1P23610 371 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 OR10J1P30954 320 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 CRATP43155 626 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 SERPINB10P48595 397 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 TAS2R45P59539 299 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 SNAP25P60880 206 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 HERVK_113P63121 156 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 TMEM267Q0VDI3 215 aaPredicted RBP0.84□□□□□ -2.27
CCDC38-204ENST00000546816 AGTRAPQ6RW13 159 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 SPATA24Q86W54 205 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 RIBC1Q8N443 379 aaPredicted RBP0.84□□□□□ -2.27
CCDC38-204ENST00000546816 C10orf126Q8N4M7 172 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 OR2D3Q8NGH3 330 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 PPCDCQ96CD2 204 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 TLCD1Q96CP7 247 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 TMEM208Q9BTX3 173 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 EIF5A2Q9GZV4 153 aaKnown RBP0.84□□□□□ -2.27
CCDC38-204ENST00000546816 METTL9Q9H1A3 318 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 NDUFB11Q9NX14 153 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 TP53TG1Q9Y2A0 90 aa0.84□□□□□ -2.27
CCDC38-204ENST00000546816 RIMS2Q9UQ26 1411 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 MDFIC2A0A1B0GVS7 189 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 DAPL1A0PJW8 107 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 ARRDC5A6NEK1 342 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 METTL15A6NJ78 407 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 TRPC5OSA6NMA1 111 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 OR11H12B2RN74 326 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 FTCDNL1E5RQL4 147 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 M0QX08 132 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CCRL2O00421 344 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 MRASO14807 208 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 PSMG1O95456 288 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 NPPAP01160 153 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 IGHV1-69P01742 117 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 ATP5G1P05496 136 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 ZNF728P0DKX0 622 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CD24P25063 80 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 MIPP30301 263 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 GRPRP30550 384 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CA7P43166 264 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 EMP2P54851 167 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 TMED1Q13445 227 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 FAM201AQ5SY85 155 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 AMTNQ6UX39 209 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 Q6ZRN7 208 aaPredicted RBP0.83□□□□□ -2.28
CCDC38-204ENST00000546816 GLT6D1Q7Z4J2 308 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 ATP5L2Q7Z4Y8 100 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 SLC35F6Q8N357 371 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CNEP1R1Q8N9A8 125 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 OR11H2Q8NH07 326 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 SPACA4Q8TDM5 124 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 MRPS24Q96EL2 167 aaKnown RBP0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CPNE2Q96FN4 548 aaPredicted RBP0.83□□□□□ -2.28
CCDC38-204ENST00000546816 RBP7Q96R05 134 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 NAA38Q9BRA0 125 aaKnown RBP0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CYSTM1Q9H1C7 97 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 WDR54Q9H977 334 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 SPACA1Q9HBV2 294 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 PARVAQ9NVD7 372 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 CD300AQ9UGN4 299 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 KLK5Q9Y337 293 aaPredicted RBP0.83□□□□□ -2.28
CCDC38-204ENST00000546816 RAD50Q92878 1312 aa0.83□□□□□ -2.28
CCDC38-204ENST00000546816 MED13Q9UHV7 2174 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 IGKV1D-43A0A0B4J1Z2 117 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 ERICH2A1L162 156 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 C2orf74A8MZ97 194 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 GSTZ1O43708 216 aaPredicted RBP0.82□□□□□ -2.28
CCDC38-204ENST00000546816 ADAP1O75689 374 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 NDUFB2O95178 105 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 LINC00614P0C842 121 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 PSMB6P28072 239 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 PEBP1P30086 187 aaKnown RBP0.82□□□□□ -2.28
CCDC38-204ENST00000546816 XCL1P47992 114 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 ZNF90Q03938 601 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 SMAGPQ0VAQ4 97 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 HLA-DRB5Q30154 266 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 Q6ZTI0 123 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 OR7G1Q8NGA0 311 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms