RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 GLDNQ6ZMI3 551 aaPredicted RBP6.98□□□□□ -1.29
VPS29-203ENST00000546588 ZNF782Q6ZMW2 699 aaPredicted RBP6.98□□□□□ -1.29
VPS29-203ENST00000546588 GLCCI1Q86VQ1 547 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 TMEM185AQ8NFB2 350 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 OR4A4PQ8NGN8 299 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 OR5H2Q8NGV7 314 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 COQ2Q96H96 371 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 GAFA1Q96PS6 74 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 MMP28Q9H239 520 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 PLEKHF2Q9H8W4 249 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 DYNLRB1Q9NP97 96 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 GSN-AS1Q9NRJ2 163 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 TMEM106BQ9NUM4 274 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 ZNF701Q9NV72 531 aaPredicted RBP6.98□□□□□ -1.29
VPS29-203ENST00000546588 NECAP2Q9NVZ3 263 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 GPR132Q9UNW8 380 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 NBASA2RRP1 2371 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 DCHS2Q6V1P9 2916 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 KIAA2026Q5HYC2 2103 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 TRAV38-1A0A0B4J264 116 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 IGHV1-69-2A0A0G2JMI3 117 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 TMEM30CPA0ZSE6 113 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 HELTA6NFD8 242 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 TRDCB7Z8K6 153 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 F5H697 171 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 FABP7O15540 132 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 IGHV2-70P01814 119 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 TK1P04183 234 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 SOD3P08294 240 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 DUSP1P28562 367 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 PRDX2P32119 198 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 MC5RP33032 325 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 UBE2G2P60604 165 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 ARF6P62330 175 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 IFITM2Q01629 132 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 CD300EQ496F6 205 aaPredicted RBP6.97□□□□□ -1.29
VPS29-203ENST00000546588 Q5PR19 223 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 TMEM17Q86X19 198 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 OR2D3Q8NGH3 330 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 OR5D13Q8NGL4 314 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 RDH5Q92781 318 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 MOB3AQ96BX8 217 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 BSCL2Q96G97 398 aaPredicted RBP6.97□□□□□ -1.29
VPS29-203ENST00000546588 GINS4Q9BRT9 223 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 LIME1Q9H400 295 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 ZNF665Q9H7R5 613 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 SDHAF2Q9NX18 166 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 ZNF230Q9UIE0 474 aaPredicted RBP6.97□□□□□ -1.29
VPS29-203ENST00000546588 MAB21L2Q9Y586 359 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 ICE1Q9Y2F5 2266 aa6.97□□□□□ -1.29
VPS29-203ENST00000546588 PPIAL4EA0A075B759 164 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 PPIAL4DF5H284 164 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 C15orf65H3BRN8 121 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 SIRPB1O00241 398 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 ARPC1BO15143 372 aaKnown RBP6.96□□□□□ -1.3
VPS29-203ENST00000546588 FCN3O75636 299 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 HEXAP06865 529 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 PPIAL4FP0DN26 164 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 OR5H8P0DN80 308 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 IRF2P14316 349 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 HLA-GP17693 338 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 AKR1D1P51857 326 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 TAS2R31P59538 309 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 RND3P61587 244 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 FOXL1Q12952 345 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 TMEM155Q4W5P6 130 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 SFRP4Q6FHJ7 346 aaPredicted RBP6.96□□□□□ -1.3
VPS29-203ENST00000546588 PRSS57Q6UWY2 283 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 KCTD9Q7L273 389 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 SLC25A42Q86VD7 318 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 TGIF2LYQ8IUE0 185 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 H1FOOQ8IZA3 346 aaPredicted RBP6.96□□□□□ -1.3
VPS29-203ENST00000546588 SPAG16Q8N0X2 631 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 BATF2Q8N1L9 274 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 OR10A7Q8NGE5 316 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 C8orf46Q8TAG6 207 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 ASB13Q8WXK3 278 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 SCGB3A2Q96PL1 93 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 CITED1Q99966 193 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 ST6GALNAC5Q9BVH7 336 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 FXYD6Q9H0Q3 95 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 RAB1BQ9H0U4 201 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 C5orf66Q9H5L9 145 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 FAM212BQ9NTI7 297 aaPredicted RBP6.96□□□□□ -1.3
VPS29-203ENST00000546588 MCUBQ9NWR8 336 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 EHFQ9NZC4 300 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 VSIG4Q9Y279 399 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 PPIAL4AQ9Y536 164 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 ALG5Q9Y673 324 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 SPTBN1Q01082 2364 aaKnown RBP6.96□□□□□ -1.3
VPS29-203ENST00000546588 EPG5Q9HCE0 2579 aa6.96□□□□□ -1.3
VPS29-203ENST00000546588 A0A0B4J2A0 478 aa6.95□□□□□ -1.3
VPS29-203ENST00000546588 A0A1B0GV90 55 aa6.95□□□□□ -1.3
VPS29-203ENST00000546588 A0A1W2PPV4 95 aa6.95□□□□□ -1.3
VPS29-203ENST00000546588 OR5H14A6NHG9 310 aa6.95□□□□□ -1.3
VPS29-203ENST00000546588 CLDN1O95832 211 aa6.95□□□□□ -1.3
VPS29-203ENST00000546588 CYB5R3P00387 301 aaPredicted RBP6.95□□□□□ -1.3
VPS29-203ENST00000546588 PPYP01298 95 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms