RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TMEM59Q9BXS4 323 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 NRN1Q9NPD7 142 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 THYN1Q9P016 225 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 IGHV2-26A0A0B4J1V2 119 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 TRAV8-6A0A0B4J262 113 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 MSTNO14793 375 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 ZNF737O75373 536 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 TIAF1O95411 115 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 IGLV3-1P01715 115 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 ESDP10768 282 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 PPOXP50336 477 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 CLRN1P58418 232 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 TMEM267Q0VDI3 215 aaPredicted RBP6.72□□□□□ -1.33
UBR1-202ENST00000546274 LRRC10Q5BKY1 277 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 RAET1LQ5VY80 246 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 PLXDC1Q8IUK5 500 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 TMEM252Q8N6L7 170 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 Q8N976 141 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 PLPPR1Q8TBJ4 325 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 UHRF2Q96PU4 802 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 PECRQ9BY49 303 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 WDR87Q6ZQQ6 2873 aa6.72□□□□□ -1.33
UBR1-202ENST00000546274 IGLV3-32A0A0A0MS00 114 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 MUC21A0A0G2JKD1 596 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 MUC21A0A140T8X8 626 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 A0A1W2PNR3 127 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 C9orf172C9J069 976 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 PROB1E7EW31 1015 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 DUX1O43812 170 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 KBTBD11O94819 623 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 TYMSP04818 313 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 OTX2P32243 289 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 MTCP1P56278 107 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 MUC21Q5SSG8 566 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 FAM71F2Q6NXP2 309 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 UEVLDQ8IX04 471 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 SLC25A45Q8N413 288 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 OR4F5Q8NH21 305 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 SGMS2Q8NHU3 365 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 OR4F4Q96R69 305 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 LRFN3Q9BTN0 628 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 ERRFI1Q9UJM3 462 aaPredicted RBP6.71□□□□□ -1.33
UBR1-202ENST00000546274 NXT1Q9UKK6 140 aaKnown RBP6.71□□□□□ -1.33
UBR1-202ENST00000546274 CNTRLQ7Z7A1 2325 aa6.71□□□□□ -1.33
UBR1-202ENST00000546274 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 IGHG1P01857 330 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 EGR1P18146 543 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 MSR1P21757 451 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 RPS20P60866 119 aaKnown RBP6.71□□□□□ -1.34
UBR1-202ENST00000546274 PRAMEF5Q5TYX0 476 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 PRAMEF6Q5VXH4 476 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 CARD17Q5XLA6 110 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 VASH2Q86V25 355 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 FAM58AQ8N1B3 248 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 TMEM204Q9BSN7 226 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 CHRDL1Q9BU40 450 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 CDC42EP3Q9UKI2 254 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 MED12Q93074 2177 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 IGKV1D-8A0A087WSZ0 117 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 KIAA1324LA8MWY0 1029 aaPredicted RBP6.71□□□□□ -1.34
UBR1-202ENST00000546274 VSTM5A8MXK1 200 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 ZNF253O75346 499 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 PITX3O75364 302 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 SRP14P37108 136 aaKnown RBP6.71□□□□□ -1.34
UBR1-202ENST00000546274 KRTCAP3Q53RY4 240 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 SPIN3Q5JUX0 258 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 RHBDD2Q6NTF9 364 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 FAM57BQ71RH2 274 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 COMMD2Q86X83 199 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 OR10G3Q8NGC4 313 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 FNDC4Q9H6D8 234 aaPredicted RBP6.71□□□□□ -1.34
UBR1-202ENST00000546274 KLRF1Q9NZS2 232 aa6.71□□□□□ -1.34
UBR1-202ENST00000546274 CRYM-AS1A6NIL9 109 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 ZNF732B4DXR9 585 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 PHF1O43189 567 aaPredicted RBP6.7□□□□□ -1.34
UBR1-202ENST00000546274 DKK1O94907 266 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 GPX1P07203 203 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 C3orf79P0CE67 100 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 TAS2R46P59540 309 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 SRSF7Q16629 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBR1-202ENST00000546274 RSPO1Q2MKA7 263 aaPredicted RBP6.7□□□□□ -1.34
UBR1-202ENST00000546274 CXorf66Q5JRM2 361 aaPredicted RBP6.7□□□□□ -1.34
UBR1-202ENST00000546274 DOK3Q7L591 496 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 FAM222BQ8WU58 562 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 NAA38Q9BRA0 125 aaKnown RBP6.7□□□□□ -1.34
UBR1-202ENST00000546274 DERL1Q9BUN8 251 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 OR10A2Q9H208 303 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 PLEKHF2Q9H8W4 249 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 RTTNQ86VV8 2226 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 PPIAL4EA0A075B759 164 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 PPIAL4CA0A0B4J2A2 164 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 NKX2-6A6NCS4 301 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 PPIAL4DF5H284 164 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 IFNA1P01562 189 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 CYC1P08574 325 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 PPIAL4FP0DN26 164 aa6.7□□□□□ -1.34
UBR1-202ENST00000546274 RPL24P83731 157 aaKnown RBP6.7□□□□□ -1.34
UBR1-202ENST00000546274 MEF2BQ02080 365 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms