RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 GFI1Q99684 422 aa9.59□□□□□ -0.87
COPS7A-221ENST00000546229 HDHD3Q9BSH5 251 aaPredicted RBP9.59□□□□□ -0.87
COPS7A-221ENST00000546229 PSORS1C1Q9UIG5 152 aa9.59□□□□□ -0.87
COPS7A-221ENST00000546229 WASHC3Q9Y3C0 194 aa9.59□□□□□ -0.87
COPS7A-221ENST00000546229 LDLRAD4O15165 306 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 SPDEFO95238 335 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 IGLV2-23P01705 113 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 CRYGBP07316 175 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 UBBP0CG47 229 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 WNT4P56705 351 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 HLA-DRB3P79483 266 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 PITPNAQ00169 270 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 ACTBL2Q562R1 376 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 ZFAND6Q6FIF0 208 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 MOB1BQ7L9L4 216 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 NANOGP1Q8N7R0 232 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 C5orf30Q96GV9 206 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 MS4A10Q96PG2 267 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 RNF5Q99942 180 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 TMEM59Q9BXS4 323 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 C11orf54Q9H0W9 315 aaPredicted RBP9.58□□□□□ -0.88
COPS7A-221ENST00000546229 LPAR5Q9H1C0 372 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 SLA2Q9H6Q3 261 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 ZMAT4Q9H898 229 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 PLCXD1Q9NUJ7 323 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 LSM2Q9Y333 95 aaKnown RBP9.58□□□□□ -0.88
COPS7A-221ENST00000546229 LRRC42Q9Y546 428 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 TNCP24821 2201 aa9.58□□□□□ -0.88
COPS7A-221ENST00000546229 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 BRI3O95415 125 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 TFAP2AP05549 437 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 MC5RP33032 325 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 TPPP2P59282 170 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 KLF5Q13887 457 aaPredicted RBP9.57□□□□□ -0.88
COPS7A-221ENST00000546229 UNQ5815/PRO19632Q6UWF5 114 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 FAM89BQ8N5H3 189 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 IL1F10Q8WWZ1 152 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 PHYHIPQ92561 330 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 METTL1Q9UBP6 276 aaKnown RBP9.57□□□□□ -0.88
COPS7A-221ENST00000546229 STEAP1Q9UHE8 339 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 AK3Q9UIJ7 227 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 ADAM30Q9UKF2 790 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 STUB1Q9UNE7 303 aa9.57□□□□□ -0.88
COPS7A-221ENST00000546229 H3BUA1 57 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 SOCS1O15524 211 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 MAPK3P27361 379 aaPredicted RBP9.56□□□□□ -0.88
COPS7A-221ENST00000546229 MECP2P51608 486 aaKnown RBP9.56□□□□□ -0.88
COPS7A-221ENST00000546229 TMEM50BP56557 158 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 DEFA5Q01523 94 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 LINC00322Q6ZN03 302 aaPredicted RBP9.56□□□□□ -0.88
COPS7A-221ENST00000546229 AHSA2Q719I0 299 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 POC5Q8NA72 575 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 DRAXINQ8NBI3 349 aaPredicted RBP9.56□□□□□ -0.88
COPS7A-221ENST00000546229 CYGBQ8WWM9 190 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 THRSPQ92748 146 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 FLYWCH2Q96CP2 140 aaKnown RBP9.56□□□□□ -0.88
COPS7A-221ENST00000546229 NEDD4LQ96PU5 975 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 GHITMQ9H3K2 345 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 ERGIC3Q9Y282 383 aa9.56□□□□□ -0.88
COPS7A-221ENST00000546229 BPNT1O95861 308 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 TRGV3P03979 118 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 SCTP09683 121 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 UCHL1P09936 223 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 TMEM267Q0VDI3 215 aaPredicted RBP9.55□□□□□ -0.88
COPS7A-221ENST00000546229 PJVKQ0ZLH3 352 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 DYRK1AQ13627 763 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 HAGHQ16775 308 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 ACSM3Q53FZ2 586 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 RNLSQ5VYX0 342 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 TTC23Q5W5X9 447 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 PACRGLQ8N7B6 248 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 SETD9Q8NE22 299 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 KCNG3Q8TAE7 436 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 ISOC1Q96CN7 298 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 OR4C12Q96R67 309 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 CLCC1Q96S66 551 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 Q9N2K0 584 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 RNF150Q9ULK6 438 aa9.55□□□□□ -0.88
COPS7A-221ENST00000546229 IZUMO1RA6ND01 250 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 MYL12BO14950 172 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 SLC25A17O43808 307 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 CSN3P07498 182 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 MED21Q13503 144 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 PLGLAQ15195 96 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 ZNF343Q6P1L6 599 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 PDPNQ86YL7 162 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 C10orf67Q8IYJ2 551 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 OR9G4Q8NGQ1 327 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 GRPEL2Q8TAA5 225 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 PALMDQ9NP74 551 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 HSF4Q9ULV5 492 aa9.54□□□□□ -0.88
COPS7A-221ENST00000546229 SRRM4A7MD48 611 aaKnown RBP9.53□□□□□ -0.88
COPS7A-221ENST00000546229 H7C2Y5 167 aa9.53□□□□□ -0.88
COPS7A-221ENST00000546229 GSTP1P09211 210 aaKnown RBP9.53□□□□□ -0.88
COPS7A-221ENST00000546229 ZBTB25P24278 435 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms