RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SLC25A5P05141 298 aaKnown RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 OR4E1P0C645 316 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 MDKP21741 143 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 KLF9Q13886 244 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 VAMP3Q15836 100 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 COMMD1Q8N668 190 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 NEU4Q8WWR8 484 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 PRSS27Q9BQR3 290 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 ZNF552Q9H707 407 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 PLEKHA2Q9HB19 425 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 FGF20Q9NP95 211 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 KIAA1549LQ6ZVL6 1849 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 FCER1GP30273 86 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 CD200P41217 278 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 ROM1Q03395 351 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 C2orf68Q2NKX9 166 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 NRN1LQ496H8 165 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 GFI1BQ5VTD9 330 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 FAM219AQ8IW50 185 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 TMEM123Q8N131 208 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 TPRX1Q8N7U7 411 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 NFAM1Q8NET5 270 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 OR4X2Q8NGF9 303 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 OR1L8Q8NGR8 309 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 RTN4RQ9BZR6 473 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 DNAJC4Q9NNZ3 241 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 SEMA5BQ9P283 1151 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 H7BYZ3 331 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 TRGC2P03986 189 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 HOXA5P20719 270 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 IL11P20809 199 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 CDKN1AP38936 164 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 UBE2V2Q15819 145 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 GUK1Q16774 197 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 TIMM23BQ5SRD1 257 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 OR4C13Q8NGP0 309 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 R3HDM4Q96D70 268 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 IMMP1LQ96LU5 166 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 NEU1Q99519 415 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 WDR61Q9GZS3 305 aaKnown RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 MSRB2Q9Y3D2 182 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 DSPPQ9NZW4 1301 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 ZNF727A8MUV8 499 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 RPL12P30050 165 aaKnown RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 RPL30P62888 115 aaKnown RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 SPINK9Q5DT21 86 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 LFNGQ8NES3 379 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 OR10A7Q8NGE5 316 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 RPUSD4Q96CM3 377 aaKnown RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 V9GYS6 101 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 UBE2L5PA0A1B0GUS4 154 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 CHST1O43916 411 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 PTBP3O95758 552 aaKnown RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 PSMB6P28072 239 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 PMELP40967 661 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 CDC34P49427 236 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 TPPP2P59282 170 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 ZNF90Q03938 601 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 MPV17LQ2QL34 196 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 PCSK4Q6UW60 755 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 OR1B1Q8NGR6 318 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 CARHSP1Q9Y2V2 147 aaKnown RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 A0A1W2PS18 150 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 ZNHIT1O43257 154 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 VSIG10L2P0DP72 767 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 GNLYP22749 145 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 MC5RP33032 325 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 MPV17P39210 176 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 PSG4Q00888 419 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 PLAURQ03405 335 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 MOGAT2Q3SYC2 334 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 ZNF770Q6IQ21 691 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-218ENST00000545889 DHRS11Q6UWP2 260 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 OR52M1Q8NGK5 317 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 STARD4Q96DR4 205 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 SIGLEC12Q96PQ1 595 aa7.41□□□□□ -1.22
CLIP1-218ENST00000545889 NGFRP08138 427 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 RPL27AP46776 148 aaKnown RBP7.4□□□□□ -1.22
CLIP1-218ENST00000545889 CDK5Q00535 292 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 MESTQ5EB52 335 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 TMEM255AQ5JRV8 349 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 LEMD1Q68G75 181 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 DYRK2Q92630 601 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 C10orf35Q96D05 121 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 CHST5Q9GZS9 411 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 SLC2A8Q9NY64 477 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 PRNDQ9UKY0 176 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 DENND4AQ7Z401 1863 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 TRAV34A0A0B4J273 112 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 NKX2-6A6NCS4 301 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 E9PLN8 166 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 PGA3P0DJD8 388 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 RCC1P18754 421 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-218ENST00000545889 LCN2P80188 198 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 COL10A1Q03692 680 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 PMS2P11Q13670 270 aa7.4□□□□□ -1.22
CLIP1-218ENST00000545889 ENDOGQ14249 297 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms