RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 CRYBA1P05813 215 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
LDHC-209ENST00000545848 GNB3P16520 340 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 FUT3P21217 361 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 BLVRBP30043 206 aaPredicted RBP4.91□□□□□ -1.62
LDHC-209ENST00000545848 SDC2P34741 201 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 KRTAP10-11P60412 298 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 RPL15P61313 204 aaKnown RBP4.91□□□□□ -1.62
LDHC-209ENST00000545848 HLA-DRB3P79483 266 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 MXD1Q05195 221 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 FOXI1Q12951 378 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 KIAA0141Q14154 515 aaPredicted RBP4.91□□□□□ -1.62
LDHC-209ENST00000545848 EBI3Q14213 229 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 RAB11BQ15907 218 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 C19orf35Q6ZS72 473 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 SLC16A12Q6ZSM3 486 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 LINC00596Q86U02 117 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 FAM71E2Q8N5Q1 922 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 LINC00311Q8N616 119 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 DRAXINQ8NBI3 349 aaPredicted RBP4.91□□□□□ -1.62
LDHC-209ENST00000545848 CLRN3Q8NCR9 226 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 OR6M1Q8NGM8 313 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 OR4C13Q8NGP0 309 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 HAVCR2Q8TDQ0 301 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 NUDCD2Q8WVJ2 157 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 YIPF6Q96EC8 236 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 NABP2Q9BQ15 211 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 BARHL1Q9BZE3 327 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 NPFFR1Q9GZQ6 430 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 VCXQ9H320 206 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 RANBP3Q9H6Z4 567 aaPredicted RBP4.91□□□□□ -1.62
LDHC-209ENST00000545848 Q9N2K0 584 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 SCN3BQ9NY72 215 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 RNF150Q9ULK6 438 aa4.91□□□□□ -1.62
LDHC-209ENST00000545848 A0A075B6Q4 140 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 IGKV1D-13A0A0B4J2D9 117 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 A0A1W2PPH5 198 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 FAM90A10PA6NDY2 464 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 FAM90A7PA6NKC0 464 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 FAM90A23PA8MXZ1 464 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 MCRIP1C9JLW8 97 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 CCRL2O00421 344 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 IGLV2-14P01704 120 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 FCGR3AP08637 254 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 GSTT2P0CG29 244 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 GSTT2BP0CG30 244 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 CT45A6P0DMU7 189 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 CT45A5P0DMU8 189 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 CT45A7P0DMV0 189 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 IGKV1-13P0DP09 117 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 TMEM11P17152 192 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 VDAC2P45880 294 aaPredicted RBP4.9□□□□□ -1.63
LDHC-209ENST00000545848 KCNJ3P48549 501 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 BRWD1-AS2P59051 145 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 LSM3P62310 102 aaKnown RBP4.9□□□□□ -1.63
LDHC-209ENST00000545848 C9orf152Q5JTZ5 239 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 FAM131AQ6UXB0 335 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 ZNF833PQ6ZTB9 187 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 MOB3BQ86TA1 216 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 CDH26Q8IXH8 852 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 MS4A15Q8N5U1 240 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 OR2C3Q8N628 320 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 ZNF383Q8NA42 475 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 OR5AU1Q8NGC0 362 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 SGMS2Q8NHU3 365 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 SETD6Q8TBK2 473 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 RPEQ96AT9 228 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 RAX2Q96IS3 184 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 ABHD14AQ9BUJ0 271 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 C11orf54Q9H0W9 315 aaPredicted RBP4.9□□□□□ -1.63
LDHC-209ENST00000545848 ALX4Q9H161 411 aaPredicted RBP4.9□□□□□ -1.63
LDHC-209ENST00000545848 KLK15Q9H2R5 256 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 PLGRKTQ9HBL7 147 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 OR2S2Q9NQN1 319 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 CKLFQ9UBR5 152 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 STEAP1Q9UHE8 339 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 GLS2Q9UI32 602 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 TRAPPC2LQ9UL33 140 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 MOB4Q9Y3A3 225 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 V9GY05 133 aa4.9□□□□□ -1.63
LDHC-209ENST00000545848 KMT2CQ8NEZ4 4911 aaKnown RBP4.9□□□□□ -1.63
LDHC-209ENST00000545848 RYR3Q15413 4870 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 TRBV6-6A0A0A6YYG2 114 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 IGHV7-81A0A0B4J1V7 117 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 TRAV1-2A0A0B4J238 106 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 A0A1B0GW64 132 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 MEIS3P1A6NDR6 274 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 BTBD17A6NE02 478 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 TMEM235A6NFC5 223 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 LINC00473A8K010 186 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 SERPINE3A8MV23 424 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 TOR1AO14656 332 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 ARPC1BO15143 372 aaKnown RBP4.89□□□□□ -1.63
LDHC-209ENST00000545848 IGLV2-23P01705 113 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 IGKV1-16P04430 117 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 MYOD1P15172 320 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 IGLL1P15814 213 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 ARSBP15848 533 aa4.89□□□□□ -1.63
LDHC-209ENST00000545848 BTF3P20290 206 aaKnown RBP4.89□□□□□ -1.63
LDHC-209ENST00000545848 MAPK3P27361 379 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms