RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 OTX2P32243 289 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 ERVK11-1P61568 191 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 CATR1Q13166 79 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 SLC10A1Q14973 349 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 ZNF146Q15072 292 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 FFAR4Q5NUL3 377 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 C9orf135Q5VTT2 229 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 TUSC5Q8IXB3 177 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 FAM173AQ9BQD7 235 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 DDA1Q9BW61 102 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 CHODLQ9H9P2 273 aa7.38□□□□□ -1.23
TDP1-204ENST00000545686 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.38□□□□□ -1.23
TDP1-204ENST00000545686 A0A1W2PR80 420 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 PDE6DO43924 150 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 LILRA1O75019 489 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 RHBDL1O75783 438 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 IGFBP4P22692 258 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 WNT5AP41221 380 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 EIF4EBP1Q13541 118 aaPredicted RBP7.37□□□□□ -1.23
TDP1-204ENST00000545686 HNF4GQ14541 408 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 ZNF709Q8N972 641 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 OR10P1Q8NGE3 313 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 RAB1CQ92928 201 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 ELOVL1Q9BW60 279 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 PRUNE2Q8WUY3 3088 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 SIRPB1O00241 398 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 IL18BPO95998 194 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 SELLP14151 372 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 NDUFB7P17568 137 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 CNN1P51911 297 aaKnown RBP7.37□□□□□ -1.23
TDP1-204ENST00000545686 SSPNQ14714 243 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 GBGT1Q8N5D6 347 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 OR2M7Q8NG81 312 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
TDP1-204ENST00000545686 LURAP1Q96LR2 239 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 IER2Q9BTL4 223 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 FUT9Q9Y231 359 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 HCFC1P51610 2035 aa7.37□□□□□ -1.23
TDP1-204ENST00000545686 CFAP54Q96N23 3096 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 ODAMA1E959 279 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 SH2D1BO14796 132 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 RAB29O14966 203 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 CLDN14O95500 239 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 RAC2P15153 192 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 CA6P23280 308 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 FOXG1P55316 489 aaPredicted RBP7.36□□□□□ -1.23
TDP1-204ENST00000545686 PPP1CBP62140 327 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 RTP5Q14D33 572 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 TMEM144Q7Z5S9 345 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 PRR18Q8N4B5 295 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 DTD1Q8TEA8 209 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 GP6Q9HCN6 339 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 FSCN3Q9NQT6 498 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 KCNIP1Q9NZI2 227 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 TMEM30CPA0ZSE6 113 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 ZNF705GA8MUZ8 300 aaPredicted RBP7.36□□□□□ -1.23
TDP1-204ENST00000545686 C11orf94C9JXX5 98 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 F6UZH7 168 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 PAGE4O60829 102 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 CDC34P49427 236 aaPredicted RBP7.36□□□□□ -1.23
TDP1-204ENST00000545686 RPL15P61313 204 aaKnown RBP7.36□□□□□ -1.23
TDP1-204ENST00000545686 GNB2P62879 340 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 FIP1L1Q6UN15 594 aaKnown RBP7.36□□□□□ -1.23
TDP1-204ENST00000545686 WDR31Q8NA23 367 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 SCCPDHQ8NBX0 429 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 KCNIP2Q9NS61 270 aa7.36□□□□□ -1.23
TDP1-204ENST00000545686 DNAJC13O75165 2243 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 TRAV39A0A0B4J263 110 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 IL3RAP26951 378 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 NUTF2P61970 127 aaKnown RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 PAX5Q02548 391 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 SRYQ05066 204 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 TFF3Q07654 80 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 FOXL1Q12952 345 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 USF2Q15853 346 aaPredicted RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 GABRA6Q16445 453 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 WDR86Q86TI4 376 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 LINC01551Q86U37 167 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 MRPL41Q8IXM3 137 aaKnown RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 DMRTC2Q8IXT2 367 aaPredicted RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 TMEM37Q8WXS4 190 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 GALMQ96C23 342 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 TAAR6Q96RI8 345 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 NEU1Q99519 415 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 OR2D2Q9H210 308 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 CLN8Q9UBY8 286 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 DOCK7Q96N67 2140 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 TMEM210A6NLX4 147 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 HMGB3O15347 200 aaKnown RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 RAMP3O60896 148 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 MPDU1O75352 247 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 NXPH2O95156 264 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 MT-CO3P00414 261 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 G6PCP35575 357 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 ZNF124Q15973 351 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 IGFBP7Q16270 282 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms